STRINGSTRING
Veis_0224 Veis_0224 Veis_0272 Veis_0272 Veis_0293 Veis_0293 Veis_0339 Veis_0339 Veis_0461 Veis_0461 Veis_0514 Veis_0514 Veis_0660 Veis_0660 Veis_0789 Veis_0789 Veis_0790 Veis_0790 Veis_0908 Veis_0908 Veis_1331 Veis_1331 Veis_1745 Veis_1745 Veis_1746 Veis_1746 Veis_1791 Veis_1791 Veis_1792 Veis_1792 Veis_1915 Veis_1915 Veis_1933 Veis_1933 Veis_2347 Veis_2347 Veis_2512 Veis_2512 Veis_2513 Veis_2513 Veis_2514 Veis_2514 Veis_2515 Veis_2515 Veis_2607 Veis_2607 Veis_2608 Veis_2608 Veis_2698 Veis_2698 Veis_2782 Veis_2782 Veis_2973 Veis_2973 Veis_3179 Veis_3179 Veis_3186 Veis_3186 Veis_3196 Veis_3196 Veis_3197 Veis_3197 Veis_3235 Veis_3235 Veis_3494 Veis_3494 Veis_3592 Veis_3592 Veis_3616 Veis_3616 Veis_3617 Veis_3617 Veis_3818 Veis_3818 Veis_3819 Veis_3819 Veis_3853 Veis_3853 Veis_4041 Veis_4041 Veis_4094 Veis_4094 Veis_4193 Veis_4193 maiA maiA Veis_4212 Veis_4212 Veis_4351 Veis_4351 Veis_4352 Veis_4352 Veis_4353 Veis_4353 Veis_4354 Veis_4354 Veis_4364 Veis_4364 Veis_4457 Veis_4457 Veis_4458 Veis_4458 Veis_4472 Veis_4472 Veis_4509 Veis_4509 Veis_4520 Veis_4520 Veis_4959 Veis_4959 Veis_4960 Veis_4960
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
Veis_0224PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mes:Meso_2951 enoyl-CoA hydratase/isomerase. (254 aa)
Veis_0272TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: pol:Bpro_2173 polyhydroxyalkanoate depolymerase, intracellular. (537 aa)
Veis_0293hydroxymethylglutaryl-CoA lyase; PFAM: pyruvate carboxyltransferase; KEGG: bxe:Bxe_A2729 putative hydroxymethylglutaryl-CoA lyase. (332 aa)
Veis_0339PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: bur:Bcep18194_C6721 acetolactate synthase, large subunit. (576 aa)
Veis_0461PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rfr:Rfer_1573 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (259 aa)
Veis_0514hydroxymethylglutaryl-CoA lyase; PFAM: pyruvate carboxyltransferase; KEGG: rfr:Rfer_3824 pyruvate carboxyltransferase. (303 aa)
Veis_0660PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_0197 aldehyde dehydrogenase. (533 aa)
Veis_0789Acetolactate synthase, large subunit; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rfr:Rfer_0882 thiamine pyrophosphate enzyme-like TPP-binding; Belongs to the TPP enzyme family. (564 aa)
Veis_0790Acetolactate synthase, large subunit; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: reh:H16_B0313 acetolactate synthase large subunit (TPP dependent). (564 aa)
Veis_0908PFAM: MaoC domain protein dehydratase; KEGG: rpc:RPC_3994 MaoC-like dehydratase. (155 aa)
Veis_1331KEGG: rfr:Rfer_3839 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
Veis_1745TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: pol:Bpro_2317 acetolactate synthase, large subunit, biosynthetic type. (593 aa)
Veis_1746TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: pol:Bpro_2318 acetolactate synthase, small subunit. (163 aa)
Veis_1791KEGG: pol:Bpro_2572 acetyl-CoA C-acyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
Veis_1792PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: rfr:Rfer_2386 3-hydroxyacyl-CoA dehydrogenase, NAD-binding. (699 aa)
Veis_1915PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: jan:Jann_3768 fumarate reductase/succinate dehydrogenase flavoprotein-like. (471 aa)
Veis_1933PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rme:Rmet_3896 thiamine pyrophosphate enzyme-like TPP-binding. (513 aa)
Veis_2347TIGRFAM: acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: rfr:Rfer_2560 acetoacetyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (244 aa)
Veis_2512PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: rsp:RSP_3147 putative succinate dehydrogenase/fumarate reductase, flavoprotein subunit. (591 aa)
Veis_2513KEGG: jan:Jann_3968 succinate dehydrogenase, cytochrome b subunit. (116 aa)
Veis_2514KEGG: jan:Jann_3967 hypothetical protein. (111 aa)
Veis_2515TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; KEGG: rsp:RSP_3150 succinate dehydrogenase/fumarate reductase Fe-S protein subunit. (251 aa)
Veis_2607KEGG: pol:Bpro_1906 3-oxoacid CoA-transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase. (213 aa)
Veis_2608KEGG: pol:Bpro_1905 3-oxoacid CoA-transferase, subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase. (235 aa)
Veis_2698KEGG: pol:Bpro_3066 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase. (364 aa)
Veis_2782Semialdehyde dehydrogenase, NAD - binding; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. (303 aa)
Veis_2973PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: bxe:Bxe_B0969 putative short-chain alcohol dehydrogenase. (158 aa)
Veis_3179KEGG: pol:Bpro_0120 acetoacetyl-CoA synthase; TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase. (695 aa)
Veis_3186KEGG: rso:RSp0996 probable tartrate dehydrogenase oxidoreductase protein; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase. (362 aa)
Veis_3196PFAM: aminotransferase class-III; KEGG: pol:Bpro_0421 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (458 aa)
Veis_3197Succinate semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: reu:Reut_B3638 aldehyde dehydrogenase. (476 aa)
Veis_3235hydroxymethylglutaryl-CoA lyase; PFAM: pyruvate carboxyltransferase; KEGG: pol:Bpro_5269 pyruvate carboxyltransferase. (314 aa)
Veis_3494PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbr:BB0533 enoyl-CoA hydratase/isomerase family protein. (245 aa)
Veis_3592PFAM: Enoyl-CoA hydratase/isomerase; KEGG: art:Arth_0423 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (262 aa)
Veis_3616KEGG: rpa:RPA4652 possible CoA transferase, subunit B. (291 aa)
Veis_3617KEGG: rpa:RPA4651 possible glutaconate CoA-transferase, subunit A. (272 aa)
Veis_3818KEGG: rfr:Rfer_2561 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
Veis_3819TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: rfr:Rfer_2562 poly(R)-hydroxyalkanoic acid synthase, class I. (566 aa)
Veis_3853PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bur:Bcep18194_C6741 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (256 aa)
Veis_4041KEGG: rfr:Rfer_0598 succinic semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (500 aa)
Veis_4094PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rfr:Rfer_3498 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (265 aa)
Veis_4193acetyl-CoA acetyltransferases; KEGG: bbr:BB2774 putative ketoacyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
maiAAsp/Glu racemase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate. (252 aa)
Veis_4212PFAM: thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rxy:Rxyl_2271 thiamine pyrophosphate enzyme-like TPP binding region. (477 aa)
Veis_4351TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: pol:Bpro_3603 succinate dehydrogenase and fumarate reductase iron-sulfur protein. (234 aa)
Veis_4352KEGG: pol:Bpro_3602 succinate dehydrogenase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (601 aa)
Veis_4353KEGG: pol:Bpro_3601 succinate dehydrogenase, cytochrome b subunit. (122 aa)
Veis_4354PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: pol:Bpro_3600 succinate dehydrogenase, cytochrome b subunit. (144 aa)
Veis_4364TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rfr:Rfer_2069 3-hydroxybutyrate dehydrogenase. (256 aa)
Veis_4457PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: pol:Bpro_3016 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; Belongs to the enoyl-CoA hydratase/isomerase family. (721 aa)
Veis_4458KEGG: pol:Bpro_3015 acetyl-CoA C-acyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
Veis_4472PFAM: Asp/Glu racemase; KEGG: bch:Bcen2424_6640 Asp/Glu racemase. (291 aa)
Veis_4509PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: hma:rrnB0209 acetolactate synthase large subunit. (560 aa)
Veis_4520PFAM: aldehyde dehydrogenase; KEGG: psp:PSPPH_2572 succinate-semialdehyde dehydrogenase (NADP+). (477 aa)
Veis_4959PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: reh:H16_B0724 enoyl-CoA hydratase/isomerase family. (703 aa)
Veis_4960acetyl-CoA acetyltransferases; KEGG: sma:SAV1384 putative acyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
Your Current Organism:
Verminephrobacter eiseniae
NCBI taxonomy Id: 391735
Other names: V. eiseniae EF01-2, Verminephrobacter eiseniae EF01-2, Verminephrobacter eiseniae str. EF01-2, Verminephrobacter eiseniae strain EF01-2
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