Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LP43_0814 | polA | LP43_0814 | LP43_0546 | Exodeoxyribonuclease I. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.434 |
| LP43_0814 | rnhA | LP43_0814 | LP43_0450 | Exodeoxyribonuclease I. | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.433 |
| LP43_2314 | LP43_2444 | LP43_2314 | LP43_2444 | DNA polymerase III epsilon subunit. | DNA polymerase III epsilon subunit. | 0.723 |
| LP43_2314 | dnaQ | LP43_2314 | LP43_0451 | DNA polymerase III epsilon subunit. | DNA polymerase III epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.717 |
| LP43_2314 | orn | LP43_2314 | LP43_2442 | DNA polymerase III epsilon subunit. | 3'-to-5' oligoribonuclease (orn); 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family. | 0.431 |
| LP43_2314 | polA | LP43_2314 | LP43_0546 | DNA polymerase III epsilon subunit. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.619 |
| LP43_2314 | rnd | LP43_2314 | LP43_1897 | DNA polymerase III epsilon subunit. | Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | 0.440 |
| LP43_2444 | LP43_2314 | LP43_2444 | LP43_2314 | DNA polymerase III epsilon subunit. | DNA polymerase III epsilon subunit. | 0.723 |
| LP43_2444 | dnaQ | LP43_2444 | LP43_0451 | DNA polymerase III epsilon subunit. | DNA polymerase III epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.909 |
| LP43_2444 | orn | LP43_2444 | LP43_2442 | DNA polymerase III epsilon subunit. | 3'-to-5' oligoribonuclease (orn); 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family. | 0.791 |
| LP43_2444 | polA | LP43_2444 | LP43_0546 | DNA polymerase III epsilon subunit. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.720 |
| LP43_2444 | rnd | LP43_2444 | LP43_1897 | DNA polymerase III epsilon subunit. | Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | 0.476 |
| LP43_2444 | rnhA | LP43_2444 | LP43_0450 | DNA polymerase III epsilon subunit. | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.591 |
| LP43_2444 | ruvC | LP43_2444 | LP43_0014 | DNA polymerase III epsilon subunit. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.439 |
| dnaQ | LP43_2314 | LP43_0451 | LP43_2314 | DNA polymerase III epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | DNA polymerase III epsilon subunit. | 0.717 |
| dnaQ | LP43_2444 | LP43_0451 | LP43_2444 | DNA polymerase III epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | DNA polymerase III epsilon subunit. | 0.909 |
| dnaQ | orn | LP43_0451 | LP43_2442 | DNA polymerase III epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 3'-to-5' oligoribonuclease (orn); 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family. | 0.525 |
| dnaQ | polA | LP43_0451 | LP43_0546 | DNA polymerase III epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.663 |
| dnaQ | rnd | LP43_0451 | LP43_1897 | DNA polymerase III epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | 0.440 |
| dnaQ | rnhA | LP43_0451 | LP43_0450 | DNA polymerase III epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.981 |
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