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| | Swoo_0008 | LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (246 aa) |
| | Swoo_0009 | TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: sse:Ssed_0011 UreA amidolyase related protein. (313 aa) |
| | Swoo_0010 | PFAM: Allophanate hydrolase subunit 1; KEGG: sse:Ssed_0012 hypothetical protein. (226 aa) |
| | fadA | acetyl-CoA C-acyltransferase FadA; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (387 aa) |
| | fadB | Fatty oxidation complex, alpha subunit FadB; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. (716 aa) |
| | Swoo_0119 | PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cps:CPS_2528 enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family. (281 aa) |
| | Swoo_0214 | PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: mlo:mll4199 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. (696 aa) |
| | Swoo_0216 | Transcriptional regulator, PaaX family; PFAM: PaaX domain protein; PaaX domain protein domain; KEGG: pen:PSEEN2789 transcriptional repressor for phenylacetic acid degradation. (311 aa) |
| | Swoo_0217 | PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; Ferric reductase NAD binding; KEGG: mmw:Mmwyl1_3091 phenylacetate-CoA oxygenase/reductase, PaaK subunit. (357 aa) |
| | Swoo_0218 | TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: reh:H16_B1360 phenylacetic acid degradation protein D. (175 aa) |
| | Swoo_0219 | TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: bbt:BBta_2867 phenylacetic acid degradation protein PaaC. (248 aa) |
| | Swoo_0220 | TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B; KEGG: bpt:Bpet1925 phenylacetic acid degradation protein. (100 aa) |
| | Swoo_0221 | TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: bpt:Bpet1924 putative phenylacetic acid degradation protein. (317 aa) |
| | Swoo_0222 | KEGG: pla:Plav_2698 beta-ketoadipyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa) |
| | Swoo_0223 | PFAM: thioesterase superfamily protein; KEGG: dac:Daci_0569 phenylacetic acid degradation protein PaaD. (158 aa) |
| | Swoo_0224 | TIGRFAM: phenylacetate degradation, enoyl-CoA hydratase paaB; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: spe:Spro_3078 phenylacetate degradation probable enoyl-CoA hydratase PaaB. (262 aa) |
| | Swoo_0225 | KEGG: mmw:Mmwyl1_3102 regulatory PhaM protein. (199 aa) |
| | Swoo_0226 | TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: MaoC domain protein dehydratase; Aldehyde Dehydrogenase; KEGG: dge:Dgeo_1913 phenylacetic acid degradation protein PaaN. (683 aa) |
| | Swoo_0227 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (433 aa) |
| | Swoo_0272 | TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sse:Ssed_0271 alcohol dehydrogenase GroES domain protein. (326 aa) |
| | Swoo_0285 | TIGRFAM: aconitate hydratase 2; PFAM: aconitate hydratase domain protein; Aconitase B, N-terminal; KEGG: sse:Ssed_0438 aconitate hydratase; Belongs to the aconitase/IPM isomerase family. (865 aa) |
| | Swoo_0319 | 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (887 aa) |
| | Swoo_0320 | Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (617 aa) |
| | Swoo_0321 | TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: spl:Spea_0421 dihydrolipoamide dehydrogenase. (476 aa) |
| | ppc | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (878 aa) |
| | Swoo_0507 | PFAM: fumarate reductase respiratory complex transmembrane subunit; KEGG: sse:Ssed_4116 fumarate reductase respiratory complex, transmembrane subunit. (241 aa) |
| | Swoo_0508 | PFAM: fumarate reductase respiratory complex transmembrane subunit; KEGG: sse:Ssed_4115 fumarate reductase respiratory complex, transmembrane subunit. (237 aa) |
| | Swoo_0509 | KEGG: sse:Ssed_4114 succinate dehydrogenase; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (674 aa) |
| | Swoo_0510 | TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; KEGG: sse:Ssed_4113 succinate dehydrogenase; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (243 aa) |
| | Swoo_0575 | PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mca:MCA2508 oxygenase, putative. (321 aa) |
| | maeA | Malate dehydrogenase (oxaloacetate-decarboxylating); PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: sse:Ssed_3518 malate dehydrogenase (oxaloacetate-decarboxylating); Belongs to the malic enzymes family. (562 aa) |
| | Swoo_0923 | PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sse:Ssed_0825 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding. (330 aa) |
| | Swoo_0937 | TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sse:Ssed_0838 formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1426 aa) |
| | mdh | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. (311 aa) |
| | Swoo_1033 | PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: sse:Ssed_0984 acyl-CoA dehydrogenase domain protein. (391 aa) |
| | Swoo_1035 | PFAM: dehydrogenase E1 component; Transketolase central region; Transketolase domain protein; KEGG: sdn:Sden_3017 transketolase, central region. (747 aa) |
| | Swoo_1113 | TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: sse:Ssed_1043 methylmalonate-semialdehyde dehydrogenase. (496 aa) |
| | Swoo_1114 | PFAM: aminotransferase class-III; KEGG: sse:Ssed_1044 beta-alanine--pyruvate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (445 aa) |
| | Swoo_1136 | PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sse:Ssed_1067 putative glutamate synthase (NADPH). (598 aa) |
| | Swoo_1137 | PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: sse:Ssed_1068 2-ketoglutarate: NADP oxidoreductase, alpha subunit. (609 aa) |
| | Swoo_1138 | PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: sse:Ssed_1069 putative ferredoxin oxidoreductase beta subunit. (350 aa) |
| | Swoo_1220 | TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sse:Ssed_1125 glutamate synthase, small subunit. (469 aa) |
| | Swoo_1221 | PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: sse:Ssed_1126 glutamate synthase (ferredoxin). (1482 aa) |
| | Swoo_1261 | PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sse:Ssed_1166 oxidoreductase FAD-binding domain protein. (365 aa) |
| | glsA | PFAM: Glutaminase, core; KEGG: sse:Ssed_1222 glutaminase; Belongs to the glutaminase family. (304 aa) |
| | Swoo_1504 | PFAM: acyl-CoA dehydrogenase domain protein; Protein of unknown function DUF1974; KEGG: spl:Spea_1234 protein of unknown function DUF1974. (745 aa) |
| | Swoo_1528 | PFAM: malate synthase; KEGG: sse:Ssed_1414 malate synthase. (468 aa) |
| | Swoo_1740 | Conserved carboxylase region; PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; Conserved carboxylase region; KEGG: pat:Patl_3012 oxaloacetate decarboxylase alpha subunit. (596 aa) |
| | Swoo_1741 | Sodium ion-translocating decarboxylase, beta subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the GcdB/MmdB/OadB family. (376 aa) |
| | Swoo_1832 | KEGG: sse:Ssed_2819 citrate (Si)-synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; Belongs to the citrate synthase family. (430 aa) |
| | Swoo_1833 | TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: sse:Ssed_2818 succinate dehydrogenase, cytochrome b subunit. (124 aa) |
| | Swoo_1834 | Succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (115 aa) |
| | Swoo_1835 | KEGG: sse:Ssed_2816 succinate dehydrogenase; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (588 aa) |
| | Swoo_1836 | TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: sse:Ssed_2815 succinate dehydrogenase (ubiquinone); Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (235 aa) |
| | Swoo_1837 | 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: sse:Ssed_2814 oxoglutarate dehydrogenase (succinyl-transferring); TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase E1 component; Transketolase central region. (940 aa) |
| | Swoo_1838 | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (396 aa) |
| | sucC | succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (388 aa) |
| | sucD | succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (290 aa) |
| | Swoo_1841 | PFAM: ferredoxin-dependent glutamate synthase; KEGG: slo:Shew_1659 ferredoxin-dependent glutamate synthase; Belongs to the glutamate synthase family. (547 aa) |
| | Swoo_1871 | Cytochrome c3; KEGG: sse:Ssed_2769 cytochrome c3. (124 aa) |
| | Swoo_1916 | PFAM: acyl-CoA dehydrogenase domain protein; KEGG: sse:Ssed_2696 acyl-CoA dehydrogenase domain protein. (596 aa) |
| | Swoo_1989 | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. (123 aa) |
| | Swoo_2010 | Coenzyme F390 synthetase-like protein; KEGG: gsu:GSU1729 phenylacetate-CoA ligase. (455 aa) |
| | Swoo_2016 | Coenzyme F390 synthetase-like protein; KEGG: mmz:MmarC7_1160 phenylacetate--CoA ligase. (452 aa) |
| | Swoo_2101 | PFAM: glutamine synthetase catalytic region; KEGG: sse:Ssed_2532 hypothetical protein. (455 aa) |
| | Swoo_2110 | PFAM: AMP-dependent synthetase and ligase; KEGG: sse:Ssed_2523 AMP-dependent synthetase and ligase. (557 aa) |
| | Swoo_2140 | PFAM: NAD-glutamate dehydrogenase; KEGG: sse:Ssed_2476 NAD-glutamate dehydrogenase. (1614 aa) |
| | Swoo_2227 | Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (504 aa) |
| | Swoo_2234 | PFAM: isocitrate lyase and phosphorylmutase; KEGG: sse:Ssed_2353 isocitrate lyase and phosphorylmutase. (527 aa) |
| | glcB | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. (725 aa) |
| | Swoo_2241 | PFAM: iron-containing alcohol dehydrogenase; KEGG: sse:Ssed_2349 iron-containing alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. (866 aa) |
| | Swoo_2267 | PFAM: aminotransferase class I and II; KEGG: sse:Ssed_2340 aminotransferase, class I and II. (403 aa) |
| | Swoo_2278 | PFAM: dehydrogenase E1 component; KEGG: sse:Ssed_2329 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring). (392 aa) |
| | Swoo_2279 | PFAM: Transketolase central region; Transketolase domain protein; KEGG: sse:Ssed_2328 transketolase, central region. (325 aa) |
| | Swoo_2280 | Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: sse:Ssed_2327 dihydrolipoyllysine-residue (2-methylpropanoyl)transferase. (526 aa) |
| | Swoo_2300 | PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sse:Ssed_2310 NADH:flavin oxidoreductase/NADH oxidase. (671 aa) |
| | Swoo_2308 | Aspartate transaminase; PFAM: aminotransferase class I and II; KEGG: sse:Ssed_2301 aspartate transaminase. (401 aa) |
| | Swoo_2322 | PFAM: AMP-dependent synthetase and ligase; KEGG: sbn:Sbal195_1058 AMP-dependent synthetase and ligase. (523 aa) |
| | Swoo_2323 | PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: sse:Ssed_2292 acyl-CoA dehydrogenase domain protein. (585 aa) |
| | Swoo_2409 | PFAM: AMP-dependent synthetase and ligase; KEGG: cps:CPS_1189 long-chain-fatty-acid--CoA ligase. (554 aa) |
| | Swoo_2443 | PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: sme:SMb21143 mercuric reductase. (469 aa) |
| | Swoo_2496 | TIGRFAM: AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: sse:Ssed_2114 putative AcnD-accessory protein PrpF. (405 aa) |
| | Swoo_2497 | TIGRFAM: 2-methylisocitrate dehydratase, Fe/S-dependent; PFAM: aconitate hydratase domain protein; KEGG: sse:Ssed_2113 2-methylisocitrate dehydratase AcnD, Fe/S-dependent. (869 aa) |
| | Swoo_2498 | KEGG: sse:Ssed_2112 2-methylcitrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; Belongs to the citrate synthase family. (374 aa) |
| | prpB | Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. (292 aa) |
| | Swoo_2500 | Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sse:Ssed_2110 transcriptional regulator, GntR family. (220 aa) |
| | Swoo_2541 | KEGG: sse:Ssed_2068 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family. (479 aa) |
| | Swoo_2542 | PFAM: acyl-CoA dehydrogenase domain protein; Protein of unknown function DUF1974; KEGG: sse:Ssed_2067 acyl-CoA dehydrogenase domain protein. (758 aa) |
| | Swoo_2604 | PFAM: acyl-CoA dehydrogenase domain protein; Protein of unknown function DUF1974; KEGG: sse:Ssed_1999 acyl-CoA dehydrogenase domain protein. (815 aa) |
| | Swoo_2702 | Isocitrate dehydrogenase, NADP-dependent; KEGG: sse:Ssed_1883 isocitrate dehydrogenase (NADP(+)); TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type; Belongs to the monomeric-type IDH family. (740 aa) |
| | Swoo_2714 | PFAM: FAD linked oxidase domain protein; KEGG: sse:Ssed_1872 D-lactate dehydrogenase (cytochrome). (1023 aa) |
| | Swoo_2715 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (789 aa) |
| | Swoo_2716 | Protein of unknown function DUF299; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. (270 aa) |
| | acsA | acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (650 aa) |
| | Swoo_2756 | PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sse:Ssed_1832 oxidoreductase FAD-binding domain protein. (339 aa) |
| | Swoo_2883 | KEGG: sse:Ssed_1708 formate C-acetyltransferase; TIGRFAM: formate acetyltransferase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase PFL. (760 aa) |
| | Swoo_2884 | Pyruvate formate-lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. (246 aa) |
| | ackA | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (398 aa) |
| | Swoo_2887 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (713 aa) |
| | Swoo_2931 | Pyruvate dehydrogenase (acetyl-transferring); PFAM: dehydrogenase E1 component; KEGG: cps:CPS_3052 TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit. (329 aa) |
| | Swoo_2932 | PFAM: Transketolase central region; Transketolase domain protein; KEGG: cps:CPS_3051 TPP-dependent acetoin dehydrogenase complex, E1 component, beta subunit. (337 aa) |
| | Swoo_2933 | PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: swi:Swit_0666 biotin/lipoyl attachment domain-containing protein. (78 aa) |
| | Swoo_2934 | PFAM: catalytic domain of components of various dehydrogenase complexes; KEGG: smu:SMU.1421 branched-chain alpha-keto acid dehydrogenase subunit E2. (228 aa) |
| | Swoo_2935 | KEGG: cps:CPS_3049 hypothetical protein. (230 aa) |
| | Swoo_2941 | PFAM: AMP-dependent synthetase and ligase; KEGG: sse:Ssed_1667 long-chain-fatty-acid--CoA ligase. (573 aa) |
| | Swoo_2943 | PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sse:Ssed_1665 NADH:flavin oxidoreductase/NADH oxidase. (672 aa) |
| | Swoo_3007 | PFAM: ferredoxin-dependent glutamate synthase; SMART: zinc finger CDGSH-type domain protein; KEGG: sse:Ssed_3552 ferredoxin-dependent glutamate synthase; Belongs to the glutamate synthase family. (516 aa) |
| | Swoo_3026 | Fatty acid oxidation complex, alpha subunit FadJ; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (713 aa) |
| | fadI | acetyl-CoA C-acyltransferase FadI; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (436 aa) |
| | Swoo_3176 | PFAM: alpha/beta hydrolase fold; KEGG: sdn:Sden_1098 alpha/beta hydrolase fold. (305 aa) |
| | Swoo_3177 | KEGG: sfr:Sfri_3850 lipase chaperone-like protein. (322 aa) |
| | Swoo_3197 | KEGG: sse:Ssed_1478 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; Belongs to the HIBADH-related family. (305 aa) |
| | Swoo_3198 | PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sse:Ssed_1477 enoyl-CoA hydratase/isomerase. (381 aa) |
| | Swoo_3199 | PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sse:Ssed_1476 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa) |
| | Swoo_3200 | PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: sse:Ssed_1475 butyryl-CoA dehydrogenase. (385 aa) |
| | Swoo_3201 | TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: sse:Ssed_1474 methylmalonate-semialdehyde dehydrogenase. (501 aa) |
| | Swoo_3202 | KEGG: sse:Ssed_1473 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa) |
| | Swoo_3221 | PFAM: AMP-dependent synthetase and ligase; KEGG: sse:Ssed_1460 AMP-dependent synthetase and ligase. (640 aa) |
| | Swoo_3222 | Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: slo:Shew_2569 transcriptional regulator, MerR family. (132 aa) |
| | Swoo_3223 | PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: sse:Ssed_1458 acyl-CoA dehydrogenase domain protein. (389 aa) |
| | Swoo_3224 | Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: spl:Spea_2798 propionyl-CoA carboxylase. (535 aa) |
| | Swoo_3225 | PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sse:Ssed_1456 enoyl-CoA hydratase/isomerase. (279 aa) |
| | Swoo_3226 | Carbamoyl-phosphate synthase L chain ATP-binding; PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: sse:Ssed_1455 carbamoyl-phosphate synthase L chain, ATP-binding. (709 aa) |
| | Swoo_3227 | PFAM: pyruvate carboxyltransferase; KEGG: sse:Ssed_1454 pyruvate carboxyltransferase. (296 aa) |
| | Swoo_3228 | KEGG: spl:Spea_2803 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase. (234 aa) |
| | Swoo_3229 | 3-oxoacid CoA-transferase, B subunit; KEGG: sse:Ssed_1452 3-oxoacid CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase. (218 aa) |
| | Swoo_3235 | PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: sse:Ssed_1446 electron transfer flavoprotein, alpha subunit. (307 aa) |
| | Swoo_3236 | PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: sse:Ssed_1445 electron transfer flavoprotein beta-subunit. (249 aa) |
| | purU | Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (277 aa) |
| | Swoo_3335 | Sodium ion-translocating decarboxylase, beta subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the GcdB/MmdB/OadB family. (376 aa) |
| | oadG | Sodium pump decarboxylase, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation. (81 aa) |
| | eno | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. (431 aa) |
| | Swoo_3413 | 4Fe-4S ferredoxin iron-sulfur binding domain protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (107 aa) |
| | Swoo_3466 | PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: sse:Ssed_3318 isocitrate dehydrogenase (NAD(+)). (335 aa) |
| | Swoo_3776 | KEGG: sse:Ssed_3877 succinate dehydrogenase; TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (596 aa) |
| | Swoo_3925 | PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: rde:RD1_4233 formate dehydrogenase, beta subunit. (562 aa) |
| | Swoo_3926 | TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rde:RD1_4234 formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (924 aa) |
| | Swoo_3995 | PFAM: AMP-dependent synthetase and ligase; KEGG: sse:Ssed_3695 AMP-dependent synthetase and ligase. (537 aa) |
| | Swoo_4199 | PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sse:Ssed_0770 enoyl-CoA hydratase/isomerase. (245 aa) |
| | Swoo_4259 | PFAM: PGAP1 family protein; KEGG: sse:Ssed_0705 lipase-like protein. (194 aa) |
| | fumC | Fumarate lyase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (458 aa) |
| | Swoo_4327 | PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sse:Ssed_0623 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (299 aa) |
| | Swoo_4423 | PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: slo:Shew_0383 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)). (415 aa) |
| | Swoo_4546 | PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: spl:Spea_3824 membrane protein involved in aromatic hydrocarbon degradation. (432 aa) |
| | Swoo_4587 | PFAM: AMP-dependent synthetase and ligase; KEGG: sse:Ssed_0331 AMP-dependent synthetase and ligase. (551 aa) |
| | Swoo_4643 | TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: spl:Spea_3916 glutamine synthetase, type I. (469 aa) |
| | Swoo_4715 | PFAM: major facilitator superfamily MFS_1; KEGG: slo:Shew_0133 phospholipid/glycerol acyltransferase. (429 aa) |
| | Swoo_4739 | TIGRFAM: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase; KEGG: vfi:VF1064 glutamate decarboxylase; Belongs to the group II decarboxylase family. (464 aa) |
| | pckA | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. (513 aa) |
| | Swoo_4794 | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. (549 aa) |
| | Swoo_4807 | TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: sse:Ssed_4415 formate dehydrogenase, C subunit, putative. (324 aa) |
| | Swoo_4808 | PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sse:Ssed_4416 4Fe-4S ferredoxin, iron-sulfur binding domain protein. (189 aa) |
| | Swoo_4809 | PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sse:Ssed_4417 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (951 aa) |
| | Swoo_4811 | TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: spl:Spea_4135 formate dehydrogenase, gamma subunit. (337 aa) |
| | Swoo_4812 | PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: slo:Shew_0060 4Fe-4S ferredoxin, iron-sulfur binding domain protein. (196 aa) |
| | Swoo_4813 | PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sse:Ssed_4421 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (949 aa) |
| | Swoo_4860 | PFAM: AMP-dependent synthetase and ligase; KEGG: spl:Spea_4186 AMP-dependent synthetase and ligase. (598 aa) |
