STRINGSTRING
Swoo_1597 Swoo_1597 Swoo_1598 Swoo_1598 Swoo_1599 Swoo_1599 Swoo_1600 Swoo_1600 Swoo_1601 Swoo_1601 Swoo_1602 Swoo_1602 flgH flgH flgI flgI Swoo_1605 Swoo_1605 Swoo_1606 Swoo_1606 fliE fliE Swoo_1618 Swoo_1618 Swoo_1619 Swoo_1619 Swoo_1620 Swoo_1620 Swoo_1621 Swoo_1621 Swoo_1625 Swoo_1625 Swoo_1626 Swoo_1626 fliP fliP Swoo_1629 Swoo_1629 Swoo_1630 Swoo_1630 flhB flhB flhA flhA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Swoo_1597Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (132 aa)
Swoo_1598TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: sse:Ssed_3086 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. (139 aa)
Swoo_1599Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein. (270 aa)
Swoo_1600PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: slo:Shew_1348 flagellar basal body FlaE domain protein. (453 aa)
Swoo_1601TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: slo:Shew_1349 flagellar basal-body rod protein FlgF; Belongs to the flagella basal body rod proteins family. (247 aa)
Swoo_1602TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: sse:Ssed_3082 flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. (262 aa)
flgHFlagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (229 aa)
flgIFlagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (363 aa)
Swoo_1605KEGG: sse:Ssed_3079 flagellar rod assembly protein/muramidase FlgJ; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2. (336 aa)
Swoo_1606TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: slo:Shew_1354 flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. (637 aa)
fliETIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: sse:Ssed_3067 flagellar hook-basal body complex subunit FliE. (110 aa)
Swoo_1618Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (568 aa)
Swoo_1619Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (349 aa)
Swoo_1620PFAM: flagellar assembly protein FliH; KEGG: sse:Ssed_3064 flagellar assembly protein FliH. (324 aa)
Swoo_1621KEGG: sse:Ssed_3063 flagellar protein export ATPase FliI; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase. (446 aa)
Swoo_1625Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (342 aa)
Swoo_1626Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (129 aa)
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (248 aa)
Swoo_1629TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: sse:Ssed_3055 flagellar biosynthetic protein FliQ. (89 aa)
Swoo_1630Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (261 aa)
flhBFlagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (377 aa)
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (699 aa)
Your Current Organism:
Shewanella woodyi
NCBI taxonomy Id: 392500
Other names: S. woodyi ATCC 51908, Shewanella woodyi ATCC 51908, Shewanella woodyi str. ATCC 51908, Shewanella woodyi strain ATCC 51908
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