(5 nodes) PQQ biosynthesis network (Shewanella woodyi)

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Your Input:
	Swoo_2248	PFAM: peptidase M16 domain protein; KEGG: cps:CPS_0856 putative metallopeptidase, M16 family. (647 aa)
	pqqE	Coenzyme PQQ biosynthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ). (371 aa)
	pqqD	Coenzyme PQQ synthesis D; Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway. (88 aa)
	pqqC	Coenzyme PQQ biosynthesis protein C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ. (249 aa)
	pqqB	Coenzyme PQQ biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family. (305 aa)

Your Current Organism:

Shewanella woodyi

NCBI taxonomy Id: 392500
Other names: S. woodyi ATCC 51908, Shewanella woodyi ATCC 51908, Shewanella woodyi str. ATCC 51908, Shewanella woodyi strain ATCC 51908

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Swoo_2248	pqqB	Swoo_2248	Swoo_2252	PFAM: peptidase M16 domain protein; KEGG: cps:CPS_0856 putative metallopeptidase, M16 family.	Coenzyme PQQ biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.	0.786
Swoo_2248	pqqC	Swoo_2248	Swoo_2251	PFAM: peptidase M16 domain protein; KEGG: cps:CPS_0856 putative metallopeptidase, M16 family.	Coenzyme PQQ biosynthesis protein C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.	0.795
Swoo_2248	pqqD	Swoo_2248	Swoo_2250	PFAM: peptidase M16 domain protein; KEGG: cps:CPS_0856 putative metallopeptidase, M16 family.	Coenzyme PQQ synthesis D; Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway.	0.788
Swoo_2248	pqqE	Swoo_2248	Swoo_2249	PFAM: peptidase M16 domain protein; KEGG: cps:CPS_0856 putative metallopeptidase, M16 family.	Coenzyme PQQ biosynthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).	0.788
pqqB	Swoo_2248	Swoo_2252	Swoo_2248	Coenzyme PQQ biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.	PFAM: peptidase M16 domain protein; KEGG: cps:CPS_0856 putative metallopeptidase, M16 family.	0.786
pqqB	pqqC	Swoo_2252	Swoo_2251	Coenzyme PQQ biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.	Coenzyme PQQ biosynthesis protein C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.	0.992
pqqB	pqqD	Swoo_2252	Swoo_2250	Coenzyme PQQ biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.	Coenzyme PQQ synthesis D; Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway.	0.980
pqqB	pqqE	Swoo_2252	Swoo_2249	Coenzyme PQQ biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.	Coenzyme PQQ biosynthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).	0.968
pqqC	Swoo_2248	Swoo_2251	Swoo_2248	Coenzyme PQQ biosynthesis protein C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.	PFAM: peptidase M16 domain protein; KEGG: cps:CPS_0856 putative metallopeptidase, M16 family.	0.795
pqqC	pqqB	Swoo_2251	Swoo_2252	Coenzyme PQQ biosynthesis protein C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.	Coenzyme PQQ biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.	0.992
pqqC	pqqD	Swoo_2251	Swoo_2250	Coenzyme PQQ biosynthesis protein C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.	Coenzyme PQQ synthesis D; Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway.	0.987
pqqC	pqqE	Swoo_2251	Swoo_2249	Coenzyme PQQ biosynthesis protein C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.	Coenzyme PQQ biosynthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).	0.979
pqqD	Swoo_2248	Swoo_2250	Swoo_2248	Coenzyme PQQ synthesis D; Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway.	PFAM: peptidase M16 domain protein; KEGG: cps:CPS_0856 putative metallopeptidase, M16 family.	0.788
pqqD	pqqB	Swoo_2250	Swoo_2252	Coenzyme PQQ synthesis D; Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway.	Coenzyme PQQ biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.	0.980
pqqD	pqqC	Swoo_2250	Swoo_2251	Coenzyme PQQ synthesis D; Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway.	Coenzyme PQQ biosynthesis protein C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.	0.987
pqqD	pqqE	Swoo_2250	Swoo_2249	Coenzyme PQQ synthesis D; Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway.	Coenzyme PQQ biosynthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).	0.976
pqqE	Swoo_2248	Swoo_2249	Swoo_2248	Coenzyme PQQ biosynthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).	PFAM: peptidase M16 domain protein; KEGG: cps:CPS_0856 putative metallopeptidase, M16 family.	0.788
pqqE	pqqB	Swoo_2249	Swoo_2252	Coenzyme PQQ biosynthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).	Coenzyme PQQ biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.	0.968
pqqE	pqqC	Swoo_2249	Swoo_2251	Coenzyme PQQ biosynthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).	Coenzyme PQQ biosynthesis protein C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.	0.979
pqqE	pqqD	Swoo_2249	Swoo_2250	Coenzyme PQQ biosynthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).	Coenzyme PQQ synthesis D; Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway.	0.976

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