STRINGSTRING
Swoo_1606 Swoo_1606 Swoo_2413 Swoo_2413 flhA flhA flhB flhB Swoo_1630 Swoo_1630 Swoo_1629 Swoo_1629 Swoo_1623 Swoo_1623 Swoo_1621 Swoo_1621 Swoo_1613 Swoo_1613 Swoo_1605 Swoo_1605 Swoo_1594 Swoo_1594 Swoo_1592 Swoo_1592 Swoo_0422 Swoo_0422 Swoo_0417 Swoo_0417
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Swoo_1606TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: slo:Shew_1354 flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. (637 aa)
Swoo_2413KEGG: sse:Ssed_2223 Bax protein, putative. (275 aa)
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (699 aa)
flhBFlagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (377 aa)
Swoo_1630Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (261 aa)
Swoo_1629TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: sse:Ssed_3055 flagellar biosynthetic protein FliQ. (89 aa)
Swoo_1623PFAM: flagellar hook-length control protein; KEGG: sse:Ssed_3061 flagellar hook-length control protein. (544 aa)
Swoo_1621KEGG: sse:Ssed_3063 flagellar protein export ATPase FliI; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase. (446 aa)
Swoo_1613PFAM: flagellar protein FliS; KEGG: sse:Ssed_3071 flagellar protein FliS. (136 aa)
Swoo_1605KEGG: sse:Ssed_3079 flagellar rod assembly protein/muramidase FlgJ; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2. (336 aa)
Swoo_1594Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. (235 aa)
Swoo_1592PFAM: FlgN family protein; KEGG: sse:Ssed_3092 FlgN family protein. (141 aa)
Swoo_0422BAX protein; KEGG: spl:Spea_3268 BAX protein. (174 aa)
Swoo_0417KEGG: vfi:VF1097 BAX protein. (322 aa)
Your Current Organism:
Shewanella woodyi
NCBI taxonomy Id: 392500
Other names: S. woodyi ATCC 51908, Shewanella woodyi ATCC 51908, Shewanella woodyi str. ATCC 51908, Shewanella woodyi strain ATCC 51908
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