STRINGSTRING
Swoo_0810 Swoo_0810 Swoo_1370 Swoo_1370 Swoo_1496 Swoo_1496 Swoo_1577 Swoo_1577 Swoo_1668 Swoo_1668 Swoo_1864 Swoo_1864 Swoo_2042 Swoo_2042 Swoo_2386 Swoo_2386 Swoo_2402 Swoo_2402 Swoo_2775 Swoo_2775 Swoo_2905 Swoo_2905 Swoo_3196 Swoo_3196 Swoo_3206 Swoo_3206 Swoo_3211 Swoo_3211 Swoo_3463 Swoo_3463 Swoo_3666 Swoo_3666 Swoo_3846 Swoo_3846 Swoo_4611 Swoo_4611 Swoo_0599 Swoo_0599 Swoo_0378 Swoo_0378 Swoo_0293 Swoo_0293 Swoo_0118 Swoo_0118
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Swoo_0810PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cyb:CYB_0892 oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (288 aa)
Swoo_1370KEGG: cps:CPS_0516 oxidoreductase, short-chain dehydrogenase/reductase family. (244 aa)
Swoo_1496PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sse:Ssed_1363 oxidoreductase, short-chain dehydrogenase/reductase family. (255 aa)
Swoo_1577KEGG: sse:Ssed_3105 flagellin modification protein A. (252 aa)
Swoo_1668PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: slo:Shew_1326 short-chain dehydrogenase/reductase SDR. (251 aa)
Swoo_1864PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bth:BT_2380 putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (237 aa)
Swoo_20423-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (248 aa)
Swoo_2386PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sse:Ssed_2239 short chain dehydrogenase. (231 aa)
Swoo_2402PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mav:MAV_3670 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (278 aa)
Swoo_2775PFAM: short-chain dehydrogenase/reductase SDR; KEGG: slo:Shew_1481 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (238 aa)
Swoo_2905PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sse:Ssed_1692 short-chain dehydrogenase/reductase SDR. (245 aa)
Swoo_3196PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sse:Ssed_1479 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (252 aa)
Swoo_3206PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sse:Ssed_1470 short-chain dehydrogenase/reductase SDR. (255 aa)
Swoo_3211PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sse:Ssed_1465 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (306 aa)
Swoo_3463PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: aha:AHA_0770 3-oxoacyl-[acyl-carrier-protein] reductase. (248 aa)
Swoo_3666PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pat:Patl_3529 short-chain dehydrogenase/reductase SDR. (255 aa)
Swoo_3846PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: vha:VIBHAR_07016 oxidoreductase. (254 aa)
Swoo_4611TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sse:Ssed_0311 3-oxoacyl-(acyl-carrier-protein) reductase, putative. (241 aa)
Swoo_0599PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sse:Ssed_4057 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (239 aa)
Swoo_0378PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sse:Ssed_4223 short chain dehydrogenase/reductase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (238 aa)
Swoo_0293PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: son:SO_0438 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (267 aa)
Swoo_0118PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pin:Ping_2106 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (268 aa)
Your Current Organism:
Shewanella woodyi
NCBI taxonomy Id: 392500
Other names: S. woodyi ATCC 51908, Shewanella woodyi ATCC 51908, Shewanella woodyi str. ATCC 51908, Shewanella woodyi strain ATCC 51908
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