STRINGSTRING
SKD02714.1 SKD02714.1 SKD02716.1 SKD02716.1 SKD02719.1 SKD02719.1 SKD07742.1 SKD07742.1 SKD07744.1 SKD07744.1 SKD07746.1 SKD07746.1 SKD08498.1 SKD08498.1 SKD08499.1 SKD08499.1 SKD08500.1 SKD08500.1 SKD08919.1 SKD08919.1 SKD08920.1 SKD08920.1 SKD08921.1 SKD08921.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SKD02714.1Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (362 aa)
SKD02716.1Multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1043 aa)
SKD02719.1Outer membrane protein TolC. (450 aa)
SKD07742.1Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1186 aa)
SKD07744.1RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (374 aa)
SKD07746.1Outer membrane protein TolC. (443 aa)
SKD08498.1Outer membrane protein TolC. (451 aa)
SKD08499.1RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (356 aa)
SKD08500.1Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1060 aa)
SKD08919.1Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1039 aa)
SKD08920.1RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (352 aa)
SKD08921.1Outer membrane protein TolC. (436 aa)
Your Current Organism:
Chitinophaga ginsengisegetis
NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040
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