(3 nodes) Non-ribosomal peptide synthase network (Chitinophaga ginsengisegetis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SKD10362.1	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. (3488 aa)
	SKD10533.1	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein; Partial gene; manually curated. (2940 aa)
	SKD10361.1	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. (2160 aa)

Your Current Organism:

Chitinophaga ginsengisegetis

NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SKD10361.1	SKD10362.1	SAMN05660461_6273	SAMN05660461_6274	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.	0.999
SKD10361.1	SKD10533.1	SAMN05660461_6273	SAMN05660461_6454	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein; Partial gene; manually curated.	0.999
SKD10362.1	SKD10361.1	SAMN05660461_6274	SAMN05660461_6273	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.	0.999
SKD10362.1	SKD10533.1	SAMN05660461_6274	SAMN05660461_6454	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein; Partial gene; manually curated.	0.999
SKD10533.1	SKD10361.1	SAMN05660461_6454	SAMN05660461_6273	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein; Partial gene; manually curated.	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.	0.999
SKD10533.1	SKD10362.1	SAMN05660461_6454	SAMN05660461_6274	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein; Partial gene; manually curated.	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.	0.999