(10 nodes) AMP-binding, conserved site network (Chitinophaga ginsengisegetis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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protein homology

Your Input:
	SKD01052.1	Non-ribosomal peptide synthetase terminal domain of unknown function; Belongs to the ATP-dependent AMP-binding enzyme family. (1310 aa)
	SKD10537.1	Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. (1045 aa)
	SKD10534.1	Amino acid adenylation domain-containing protein. (1542 aa)
	SKD10533.1	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein; Partial gene; manually curated. (2940 aa)
	SKD10362.1	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. (3488 aa)
	SKD10361.1	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. (2160 aa)
	SKD08906.1	Long-chain acyl-CoA synthetase. (598 aa)
	SKD08077.1	acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. (637 aa)
	SKD07767.1	Long-chain acyl-CoA synthetase. (604 aa)
	SKC95278.1	Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. (1035 aa)

Your Current Organism:

Chitinophaga ginsengisegetis

NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SKC95278.1	SKD01052.1	SAMN05660461_0322	SAMN05660461_2049	Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.	Non-ribosomal peptide synthetase terminal domain of unknown function; Belongs to the ATP-dependent AMP-binding enzyme family.	0.941
SKC95278.1	SKD07767.1	SAMN05660461_0322	SAMN05660461_3803	Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.	Long-chain acyl-CoA synthetase.	0.826
SKC95278.1	SKD08077.1	SAMN05660461_0322	SAMN05660461_4028	Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.	acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.	0.598
SKC95278.1	SKD08906.1	SAMN05660461_0322	SAMN05660461_4783	Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.	Long-chain acyl-CoA synthetase.	0.826
SKC95278.1	SKD10361.1	SAMN05660461_0322	SAMN05660461_6273	Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.	0.999
SKC95278.1	SKD10362.1	SAMN05660461_0322	SAMN05660461_6274	Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.	0.999
SKC95278.1	SKD10533.1	SAMN05660461_0322	SAMN05660461_6454	Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein; Partial gene; manually curated.	0.999
SKC95278.1	SKD10534.1	SAMN05660461_0322	SAMN05660461_6455	Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.	Amino acid adenylation domain-containing protein.	0.998
SKC95278.1	SKD10537.1	SAMN05660461_0322	SAMN05660461_6458	Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.	Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.	0.999
SKD01052.1	SKC95278.1	SAMN05660461_2049	SAMN05660461_0322	Non-ribosomal peptide synthetase terminal domain of unknown function; Belongs to the ATP-dependent AMP-binding enzyme family.	Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.	0.941
SKD01052.1	SKD07767.1	SAMN05660461_2049	SAMN05660461_3803	Non-ribosomal peptide synthetase terminal domain of unknown function; Belongs to the ATP-dependent AMP-binding enzyme family.	Long-chain acyl-CoA synthetase.	0.425
SKD01052.1	SKD08906.1	SAMN05660461_2049	SAMN05660461_4783	Non-ribosomal peptide synthetase terminal domain of unknown function; Belongs to the ATP-dependent AMP-binding enzyme family.	Long-chain acyl-CoA synthetase.	0.425
SKD01052.1	SKD10361.1	SAMN05660461_2049	SAMN05660461_6273	Non-ribosomal peptide synthetase terminal domain of unknown function; Belongs to the ATP-dependent AMP-binding enzyme family.	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.	0.985
SKD01052.1	SKD10362.1	SAMN05660461_2049	SAMN05660461_6274	Non-ribosomal peptide synthetase terminal domain of unknown function; Belongs to the ATP-dependent AMP-binding enzyme family.	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.	0.942
SKD01052.1	SKD10533.1	SAMN05660461_2049	SAMN05660461_6454	Non-ribosomal peptide synthetase terminal domain of unknown function; Belongs to the ATP-dependent AMP-binding enzyme family.	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein; Partial gene; manually curated.	0.985
SKD01052.1	SKD10534.1	SAMN05660461_2049	SAMN05660461_6455	Non-ribosomal peptide synthetase terminal domain of unknown function; Belongs to the ATP-dependent AMP-binding enzyme family.	Amino acid adenylation domain-containing protein.	0.593
SKD01052.1	SKD10537.1	SAMN05660461_2049	SAMN05660461_6458	Non-ribosomal peptide synthetase terminal domain of unknown function; Belongs to the ATP-dependent AMP-binding enzyme family.	Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.	0.985
SKD07767.1	SKC95278.1	SAMN05660461_3803	SAMN05660461_0322	Long-chain acyl-CoA synthetase.	Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.	0.826
SKD07767.1	SKD01052.1	SAMN05660461_3803	SAMN05660461_2049	Long-chain acyl-CoA synthetase.	Non-ribosomal peptide synthetase terminal domain of unknown function; Belongs to the ATP-dependent AMP-binding enzyme family.	0.425
SKD07767.1	SKD10362.1	SAMN05660461_3803	SAMN05660461_6274	Long-chain acyl-CoA synthetase.	Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.	0.485