(23 nodes) Biotin-lipoyl like network (Chitinophaga ginsengisegetis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SKD08885.1	Multidrug efflux pump subunit AcrA (membrane-fusion protein). (359 aa)
	SKC95277.1	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (360 aa)
	SKC95406.1	Membrane fusion protein, cobalt-zinc-cadmium efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (369 aa)
	SKC97229.1	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (347 aa)
	SKD02714.1	Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (362 aa)
	SKD05561.1	Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (402 aa)
	SKD07744.1	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (374 aa)
	SKD07814.1	HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (409 aa)
	SKD08027.1	HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (461 aa)
	SKD08089.1	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (374 aa)
	SKD08671.1	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (363 aa)
	SKD08720.1	Membrane fusion protein, multidrug efflux system. (357 aa)
	SKD08820.1	HlyD family secretion protein. (329 aa)
	SKD08920.1	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (352 aa)
	SKD08933.1	Membrane fusion protein, multidrug efflux system. (348 aa)
	SKD08962.1	Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (378 aa)
	SKD09097.1	Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (360 aa)
	SKD09240.1	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (342 aa)
	SKD09306.1	Membrane fusion protein, Cu(I)/Ag(I) efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (407 aa)
	SKD09307.1	Multidrug efflux pump subunit AcrA (membrane-fusion protein). (399 aa)
	SKD09557.1	Membrane fusion protein, multidrug efflux system. (354 aa)
	SKD09973.1	Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (391 aa)
	SKD10248.1	Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (397 aa)

Your Current Organism:

Chitinophaga ginsengisegetis

NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SKC95277.1	SKD02714.1	SAMN05660461_0321	SAMN05660461_2619	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.477
SKC95277.1	SKD07744.1	SAMN05660461_0321	SAMN05660461_3791	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.609
SKC95277.1	SKD08820.1	SAMN05660461_0321	SAMN05660461_4697	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	HlyD family secretion protein.	0.411
SKC95277.1	SKD08933.1	SAMN05660461_0321	SAMN05660461_4810	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Membrane fusion protein, multidrug efflux system.	0.407
SKC95277.1	SKD09240.1	SAMN05660461_0321	SAMN05660461_5123	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.481
SKC95406.1	SKD02714.1	SAMN05660461_0373	SAMN05660461_2619	Membrane fusion protein, cobalt-zinc-cadmium efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.474
SKC95406.1	SKD08089.1	SAMN05660461_0373	SAMN05660461_4040	Membrane fusion protein, cobalt-zinc-cadmium efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.522
SKC95406.1	SKD09306.1	SAMN05660461_0373	SAMN05660461_5190	Membrane fusion protein, cobalt-zinc-cadmium efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Membrane fusion protein, Cu(I)/Ag(I) efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.433
SKC97229.1	SKD02714.1	SAMN05660461_0876	SAMN05660461_2619	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.490
SKC97229.1	SKD08962.1	SAMN05660461_0876	SAMN05660461_4839	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.400
SKC97229.1	SKD09240.1	SAMN05660461_0876	SAMN05660461_5123	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.451
SKD02714.1	SKC95277.1	SAMN05660461_2619	SAMN05660461_0321	Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.477
SKD02714.1	SKC95406.1	SAMN05660461_2619	SAMN05660461_0373	Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Membrane fusion protein, cobalt-zinc-cadmium efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.474
SKD02714.1	SKC97229.1	SAMN05660461_2619	SAMN05660461_0876	Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.490
SKD02714.1	SKD05561.1	SAMN05660461_2619	SAMN05660461_3132	Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.414
SKD02714.1	SKD07744.1	SAMN05660461_2619	SAMN05660461_3791	Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.550
SKD02714.1	SKD08089.1	SAMN05660461_2619	SAMN05660461_4040	Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.433
SKD02714.1	SKD08671.1	SAMN05660461_2619	SAMN05660461_4547	Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.471
SKD02714.1	SKD08820.1	SAMN05660461_2619	SAMN05660461_4697	Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	HlyD family secretion protein.	0.418
SKD02714.1	SKD08920.1	SAMN05660461_2619	SAMN05660461_4797	Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.513