STRINGSTRING
SKD10292.1 SKD10292.1 SKD10417.1 SKD10417.1 SKD10392.1 SKD10392.1 SKD10316.1 SKD10316.1 SKD10045.1 SKD10045.1 SKD10025.1 SKD10025.1 SKD10024.1 SKD10024.1 SKD10007.1 SKD10007.1 SKD10006.1 SKD10006.1 SKD09964.1 SKD09964.1 SKD09729.1 SKD09729.1 SKD09678.1 SKD09678.1 SKD09663.1 SKD09663.1 SKD09662.1 SKD09662.1 SKD09658.1 SKD09658.1 SKD09650.1 SKD09650.1 SKD09647.1 SKD09647.1 SKD09618.1 SKD09618.1 SKD09483.1 SKD09483.1 SKD09423.1 SKD09423.1 SKD09383.1 SKD09383.1 SKD09259.1 SKD09259.1 SKD09253.1 SKD09253.1 SKD09170.1 SKD09170.1 SKD08957.1 SKD08957.1 SKD08878.1 SKD08878.1 pgi pgi glk glk SKD08698.1 SKD08698.1 SKD08542.1 SKD08542.1 SKD08328.1 SKD08328.1 SKD08240.1 SKD08240.1 SKD08212.1 SKD08212.1 SKD08173.1 SKD08173.1 murA murA SKD07976.1 SKD07976.1 SKD07905.1 SKD07905.1 SKD07903.1 SKD07903.1 SKD07891.1 SKD07891.1 SKD07887.1 SKD07887.1 gmd-2 gmd-2 fcl-2 fcl-2 SKD07872.1 SKD07872.1 SKD07868.1 SKD07868.1 SKD07663.1 SKD07663.1 SKD07009.1 SKD07009.1 SKD06993.1 SKD06993.1 SKD06904.1 SKD06904.1 SKD06902.1 SKD06902.1 SKD06752.1 SKD06752.1 SKD06375.1 SKD06375.1 SKD06219.1 SKD06219.1 SKD06216.1 SKD06216.1 SKD06009.1 SKD06009.1 SKD05681.1 SKD05681.1 murQ murQ SKD05506.1 SKD05506.1 SKD05032.1 SKD05032.1 fcl fcl SKD05026.1 SKD05026.1 gmd gmd SKD04976.1 SKD04976.1 SKD04732.1 SKD04732.1 SKD04667.1 SKD04667.1 SKD04620.1 SKD04620.1 SKD02892.1 SKD02892.1 SKD02743.1 SKD02743.1 SKD02427.1 SKD02427.1 SKD02241.1 SKD02241.1 SKD01847.1 SKD01847.1 SKD00966.1 SKD00966.1 SKD00816.1 SKD00816.1 SKD00722.1 SKD00722.1 SKD00635.1 SKD00635.1 SKD00618.1 SKD00618.1 SKD00580.1 SKD00580.1 murB murB SKD00279.1 SKD00279.1 SKD00276.1 SKD00276.1 SKD00256.1 SKD00256.1 SKD00247.1 SKD00247.1 glmS glmS SKC99894.1 SKC99894.1 SKC99892.1 SKC99892.1 SKC99794.1 SKC99794.1 SKC99726.1 SKC99726.1 SKC99587.1 SKC99587.1 SKC98758.1 SKC98758.1 SKC98644.1 SKC98644.1 SKC98068.1 SKC98068.1 SKC98057.1 SKC98057.1 SKC98054.1 SKC98054.1 SKC98047.1 SKC98047.1 SKC98044.1 SKC98044.1 SKC97410.1 SKC97410.1 SKC97390.1 SKC97390.1 SKC97310.1 SKC97310.1 SKC97213.1 SKC97213.1 SKC97151.1 SKC97151.1 SKC96860.1 SKC96860.1 SKC96265.1 SKC96265.1 SKC96246.1 SKC96246.1 SKC95784.1 SKC95784.1 SKC95740.1 SKC95740.1 SKC95674.1 SKC95674.1 SKC95601.1 SKC95601.1 SKC95464.1 SKC95464.1 SKC95397.1 SKC95397.1 SKC95188.1 SKC95188.1 SKC94947.1 SKC94947.1 SKC94900.1 SKC94900.1 SKC94819.1 SKC94819.1 SKC94635.1 SKC94635.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SKD10292.1Mannose-6-phosphate isomerase, class I. (598 aa)
SKD10417.1Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. (409 aa)
SKD10392.1tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. (145 aa)
SKD10316.1Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. (505 aa)
SKD10045.1Nucleoside-diphosphate-sugar epimerase. (292 aa)
SKD10025.1Glycosyl hydrolase family 20, catalytic domain. (709 aa)
SKD10024.1Glycosyl hydrolase family 20, catalytic domain. (692 aa)
SKD10007.1dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. (461 aa)
SKD10006.1dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. (460 aa)
SKD09964.1Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. (296 aa)
SKD09729.1Acetyltransferase (isoleucine patch superfamily). (185 aa)
SKD09678.1Glucose-1-phosphate adenylyltransferase. (423 aa)
SKD09663.1DegT/DnrJ/EryC1/StrS aminotransferase family protein; Belongs to the DegT/DnrJ/EryC1 family. (392 aa)
SKD09662.1Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family. (193 aa)
SKD09658.1UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (372 aa)
SKD09650.1UDP-N-acetyl-D-galactosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (437 aa)
SKD09647.1NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC. (645 aa)
SKD09618.1Glucokinase. (292 aa)
SKD09483.1Hexosaminidase. (635 aa)
SKD09423.1Hypothetical protein. (156 aa)
SKD09383.1Glycosyl hydrolases family 43; Non-canonical start codon; manually curated; Belongs to the glycosyl hydrolase 43 family. (483 aa)
SKD09259.1Xylan 1,4-beta-xylosidase. (563 aa)
SKD09253.1Por secretion system C-terminal sorting domain-containing protein; Belongs to the glycosyl hydrolase 18 family. (542 aa)
SKD09170.1Hexosaminidase. (764 aa)
SKD08957.1Dihydroflavonol-4-reductase. (326 aa)
SKD08878.1Hypothetical protein. (399 aa)
pgiGlucose-6-phosphate isomerase; Belongs to the GPI family. (551 aa)
glkGlucokinase; Belongs to the bacterial glucokinase family. (351 aa)
SKD08698.1Mannose-6-phosphate isomerase, type 1. (400 aa)
SKD08542.1Metal-dependent hydrolase, beta-lactamase superfamily II. (325 aa)
SKD08328.1Nucleoside-diphosphate-sugar epimerase. (331 aa)
SKD08240.1Mannose-1-phosphate guanylyltransferase. (363 aa)
SKD08212.1dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. (396 aa)
SKD08173.1Beta-glucosidase. (994 aa)
murAUDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (436 aa)
SKD07976.1N-acetylglucosamine-6-phosphate deacetylase. (365 aa)
SKD07905.1Acetyltransferase (isoleucine patch superfamily). (197 aa)
SKD07903.1dTDP-L-rhamnose 4-epimerase. (380 aa)
SKD07891.1Glycosyl hydrolase family 67 N-terminus. (584 aa)
SKD07887.1Nucleoside-diphosphate-sugar epimerase. (320 aa)
gmd-2GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (370 aa)
fcl-2GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (310 aa)
SKD07872.1Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family. (205 aa)
SKD07868.1Perosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. (370 aa)
SKD07663.1Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). (211 aa)
SKD07009.1Hypothetical protein. (351 aa)
SKD06993.1Hexosaminidase. (870 aa)
SKD06904.1UDPglucose 6-dehydrogenase. (437 aa)
SKD06902.1dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. (375 aa)
SKD06752.1Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. (373 aa)
SKD06375.1Cupin domain-containing protein. (108 aa)
SKD06219.1Glucosamine-6-phosphate deaminase. (249 aa)
SKD06216.1N-acetylglucosamine-6-phosphate deacetylase. (396 aa)
SKD06009.1Phosphomannomutase. (460 aa)
SKD05681.1BadF/BadG/BcrA/BcrD ATPase family protein. (282 aa)
murQN-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. (272 aa)
SKD05506.1Uncharacterized conserved protein YbbC, DUF1343 family. (388 aa)
SKD05032.1Mannose-1-phosphate guanylyltransferase. (340 aa)
fclGDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (314 aa)
SKD05026.1UDP-glucose dehydrogenase. (448 aa)
gmdGDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (365 aa)
SKD04976.1Putative colanic acid biosynthesis acetyltransferase WcaF. (193 aa)
SKD04732.1Beta-xylosidase, GH43 family; Belongs to the glycosyl hydrolase 43 family. (341 aa)
SKD04667.1Mannobiose 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man). (393 aa)
SKD04620.1Fructokinase. (294 aa)
SKD02892.1CDP-4-dehydro-6-deoxyglucose reductase. (239 aa)
SKD02743.1Predicted chitinase. (1286 aa)
SKD02427.1UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (342 aa)
SKD02241.1Nucleoside-diphosphate-sugar epimerase. (327 aa)
SKD01847.1Nucleoside-diphosphate-sugar epimerase. (345 aa)
SKD00966.1Glucokinase. (286 aa)
SKD00816.1N-acetylneuraminate lyase; Belongs to the DapA family. (305 aa)
SKD00722.1Xylan 1,4-beta-xylosidase. (530 aa)
SKD00635.1Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. (394 aa)
SKD00618.1Fructokinase. (300 aa)
SKD00580.1F5/8 type C domain-containing protein; Belongs to the glycosyl hydrolase 43 family. (580 aa)
murBUDP-N-acetylmuramate dehydrogenase; Cell wall formation. (338 aa)
SKD00279.1Glucosamine-6-phosphate deaminase. (641 aa)
SKD00276.1Hexosaminidase. (764 aa)
SKD00256.1Glucokinase. (323 aa)
SKD00247.1Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. (381 aa)
glmSGlucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (611 aa)
SKC99894.1Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. (412 aa)
SKC99892.1N-acylglucosamine 2-epimerase. (406 aa)
SKC99794.1UDPglucose--hexose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family. (357 aa)
SKC99726.1Glycosyl hydrolases family 18; Belongs to the glycosyl hydrolase 18 family. (317 aa)
SKC99587.1Hypothetical protein. (518 aa)
SKC98758.1Phosphoglucomutase. (574 aa)
SKC98644.1Chitinase. (637 aa)
SKC98068.1Chitinase, GH18 family. (610 aa)
SKC98057.1Glycosyl hydrolases family 18. (449 aa)
SKC98054.1Glycosyl hydrolase family 20, catalytic domain. (509 aa)
SKC98047.1N-acetylglucosamine-6-phosphate deacetylase. (402 aa)
SKC98044.1Glucosamine-6-phosphate deaminase. (257 aa)
SKC97410.1alpha-N-arabinofuranosidase. (516 aa)
SKC97390.1Alpha-L-arabinofuranosidase. (660 aa)
SKC97310.1Predicted metalloprotease, contains C-terminal PDZ domain. (1318 aa)
SKC97213.1F5/8 type C domain-containing protein. (745 aa)
SKC97151.1Hypothetical protein. (252 aa)
SKC96860.1Peroxiredoxin (alkyl hydroperoxide reductase subunit C). (184 aa)
SKC96265.1Dihydroflavonol-4-reductase. (324 aa)
SKC96246.1Hexosaminidase. (532 aa)
SKC95784.1Beta-xylosidase. (657 aa)
SKC95740.1Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. (357 aa)
SKC95674.1Nucleoside-diphosphate-sugar epimerase. (307 aa)
SKC95601.1Nucleoside-diphosphate-sugar epimerase. (299 aa)
SKC95464.1Hexosaminidase. (528 aa)
SKC95397.1Glycosyl hydrolase family 20, catalytic domain. (361 aa)
SKC95188.1Glycosyl hydrolases family 18. (711 aa)
SKC94947.1Beta-xylosidase, GH43 family; Belongs to the glycosyl hydrolase 43 family. (508 aa)
SKC94900.1Alpha-L-arabinofuranosidase. (645 aa)
SKC94819.1Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. (327 aa)
SKC94635.1Transferase hexapeptide (six repeat-containing protein). (204 aa)
Your Current Organism:
Chitinophaga ginsengisegetis
NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040
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