STRINGSTRING
CtfA CtfA HQ45_02745 HQ45_02745 etfB_1 etfB_1 etfA_1 etfA_1 HQ45_04130 HQ45_04130 PaaH PaaH KamA KamA HQ45_08530 HQ45_08530 HQ45_08535 HQ45_08535 HQ45_08540 HQ45_08540 EchA8 EchA8 EtfA_2 EtfA_2 etfB_2 etfB_2 HQ45_09520 HQ45_09520 ctfB ctfB HQ45_09530 HQ45_09530 HQ45_09535 HQ45_09535 HQ45_09545 HQ45_09545
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CtfABranched-chain amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
HQ45_02745Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)
etfB_1Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
etfA_1Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)
HQ45_04130acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (573 aa)
PaaH3-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
KamALysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
HQ45_08530L-erythro-3,5-diaminohexanoate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)
HQ45_085353-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
HQ45_085403-aminobutyryl-CoA ammonia lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)
EchA8Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)
EtfA_2Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
etfB_2Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
HQ45_09520acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
ctfBAcetate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
HQ45_09530Dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
HQ45_09535Dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (523 aa)
HQ45_09545Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)
Your Current Organism:
Porphyromonas crevioricanis
NCBI taxonomy Id: 393921
Other names: ATCC 55563, CCUG 47702 [[Porphyromonas cansulci]], JCM 13913 [[Porphyromonas cansulci]], JCM 15906, NCTC 12858 [[Porphyromonas cansulci]], NUM 402, P. crevioricanis, Porphyromonas cansulci, VPB 4875 [[Porphyromonas cansulci]]
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