(13 nodes) Beta-lactamase/transpeptidase-like network (Sulfitobacter marinus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SFS45359.1	D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. (389 aa)
	SFS50050.1	Beta-lactamase. (294 aa)
	SFS50528.1	Penicillin-binding protein 1A. (851 aa)
	SFS69113.1	CubicO group peptidase, beta-lactamase class C family. (465 aa)
	SFS69315.1	CubicO group peptidase, beta-lactamase class C family. (427 aa)
	SFS71273.1	Cell division protein FtsI (penicillin-binding protein 3). (595 aa)
	glsA	L-glutaminase; Belongs to the glutaminase family. (303 aa)
	SFS96053.1	Peptidoglycan glycosyltransferase. (647 aa)
	SFS96856.1	D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). (498 aa)
	SFS98609.1	Hypothetical protein. (390 aa)
	SFT06912.1	Penicillin-binding protein, 1A family. (711 aa)
	SFT12015.1	CubicO group peptidase, beta-lactamase class C family. (400 aa)
	SFT13408.1	D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. (535 aa)

Your Current Organism:

Sulfitobacter marinus

NCBI taxonomy Id: 394264
Other names: DSM 23422, JCM 13602, KCTC 12738, Sulfitobacter marinus Yoon et al. 2007, strain SW-265

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFS45359.1	SFS50528.1	SAMN04488040_0409	SAMN04488040_0670	D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.	Penicillin-binding protein 1A.	0.919
SFS45359.1	SFS71273.1	SAMN04488040_0409	SAMN04488040_1712	D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.	Cell division protein FtsI (penicillin-binding protein 3).	0.642
SFS45359.1	SFS96053.1	SAMN04488040_0409	SAMN04488040_2484	D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.	Peptidoglycan glycosyltransferase.	0.580
SFS45359.1	SFS96856.1	SAMN04488040_0409	SAMN04488040_2526	D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.	D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).	0.919
SFS45359.1	SFT06912.1	SAMN04488040_0409	SAMN04488040_2973	D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.	Penicillin-binding protein, 1A family.	0.919
SFS45359.1	SFT13408.1	SAMN04488040_0409	SAMN04488040_3336	D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.	D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.	0.486
SFS50528.1	SFS45359.1	SAMN04488040_0670	SAMN04488040_0409	Penicillin-binding protein 1A.	D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.	0.919
SFS50528.1	SFS71273.1	SAMN04488040_0670	SAMN04488040_1712	Penicillin-binding protein 1A.	Cell division protein FtsI (penicillin-binding protein 3).	0.638
SFS50528.1	SFS96053.1	SAMN04488040_0670	SAMN04488040_2484	Penicillin-binding protein 1A.	Peptidoglycan glycosyltransferase.	0.731
SFS50528.1	SFT06912.1	SAMN04488040_0670	SAMN04488040_2973	Penicillin-binding protein 1A.	Penicillin-binding protein, 1A family.	0.962
SFS50528.1	SFT13408.1	SAMN04488040_0670	SAMN04488040_3336	Penicillin-binding protein 1A.	D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.	0.658
SFS71273.1	SFS45359.1	SAMN04488040_1712	SAMN04488040_0409	Cell division protein FtsI (penicillin-binding protein 3).	D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.	0.642
SFS71273.1	SFS50528.1	SAMN04488040_1712	SAMN04488040_0670	Cell division protein FtsI (penicillin-binding protein 3).	Penicillin-binding protein 1A.	0.638
SFS71273.1	SFS96053.1	SAMN04488040_1712	SAMN04488040_2484	Cell division protein FtsI (penicillin-binding protein 3).	Peptidoglycan glycosyltransferase.	0.941
SFS71273.1	SFT06912.1	SAMN04488040_1712	SAMN04488040_2973	Cell division protein FtsI (penicillin-binding protein 3).	Penicillin-binding protein, 1A family.	0.961
SFS71273.1	SFT13408.1	SAMN04488040_1712	SAMN04488040_3336	Cell division protein FtsI (penicillin-binding protein 3).	D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.	0.887
SFS96053.1	SFS45359.1	SAMN04488040_2484	SAMN04488040_0409	Peptidoglycan glycosyltransferase.	D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.	0.580
SFS96053.1	SFS50528.1	SAMN04488040_2484	SAMN04488040_0670	Peptidoglycan glycosyltransferase.	Penicillin-binding protein 1A.	0.731
SFS96053.1	SFS71273.1	SAMN04488040_2484	SAMN04488040_1712	Peptidoglycan glycosyltransferase.	Cell division protein FtsI (penicillin-binding protein 3).	0.941
SFS96053.1	SFT06912.1	SAMN04488040_2484	SAMN04488040_2973	Peptidoglycan glycosyltransferase.	Penicillin-binding protein, 1A family.	0.904