(4 nodes) Penicillin binding protein transpeptidase domain network (Sulfitobacter marinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SFS50528.1	Penicillin-binding protein 1A. (851 aa)
	SFS71273.1	Cell division protein FtsI (penicillin-binding protein 3). (595 aa)
	SFS96053.1	Peptidoglycan glycosyltransferase. (647 aa)
	SFT06912.1	Penicillin-binding protein, 1A family. (711 aa)

Your Current Organism:

Sulfitobacter marinus

NCBI taxonomy Id: 394264
Other names: DSM 23422, JCM 13602, KCTC 12738, Sulfitobacter marinus Yoon et al. 2007, strain SW-265

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFS50528.1	SFS71273.1	SAMN04488040_0670	SAMN04488040_1712	Penicillin-binding protein 1A.	Cell division protein FtsI (penicillin-binding protein 3).	0.638
SFS50528.1	SFS96053.1	SAMN04488040_0670	SAMN04488040_2484	Penicillin-binding protein 1A.	Peptidoglycan glycosyltransferase.	0.731
SFS50528.1	SFT06912.1	SAMN04488040_0670	SAMN04488040_2973	Penicillin-binding protein 1A.	Penicillin-binding protein, 1A family.	0.962
SFS71273.1	SFS50528.1	SAMN04488040_1712	SAMN04488040_0670	Cell division protein FtsI (penicillin-binding protein 3).	Penicillin-binding protein 1A.	0.638
SFS71273.1	SFS96053.1	SAMN04488040_1712	SAMN04488040_2484	Cell division protein FtsI (penicillin-binding protein 3).	Peptidoglycan glycosyltransferase.	0.941
SFS71273.1	SFT06912.1	SAMN04488040_1712	SAMN04488040_2973	Cell division protein FtsI (penicillin-binding protein 3).	Penicillin-binding protein, 1A family.	0.961
SFS96053.1	SFS50528.1	SAMN04488040_2484	SAMN04488040_0670	Peptidoglycan glycosyltransferase.	Penicillin-binding protein 1A.	0.731
SFS96053.1	SFS71273.1	SAMN04488040_2484	SAMN04488040_1712	Peptidoglycan glycosyltransferase.	Cell division protein FtsI (penicillin-binding protein 3).	0.941
SFS96053.1	SFT06912.1	SAMN04488040_2484	SAMN04488040_2973	Peptidoglycan glycosyltransferase.	Penicillin-binding protein, 1A family.	0.904
SFT06912.1	SFS50528.1	SAMN04488040_2973	SAMN04488040_0670	Penicillin-binding protein, 1A family.	Penicillin-binding protein 1A.	0.962
SFT06912.1	SFS71273.1	SAMN04488040_2973	SAMN04488040_1712	Penicillin-binding protein, 1A family.	Cell division protein FtsI (penicillin-binding protein 3).	0.961
SFT06912.1	SFS96053.1	SAMN04488040_2973	SAMN04488040_2484	Penicillin-binding protein, 1A family.	Peptidoglycan glycosyltransferase.	0.904