(5 nodes) Retromer, cargo-selective complex, and Intralumenal vesicle formation network (Saimiri boliviensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VPS35	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (797 aa)
	ENSSBOP00000015324	Metallophos_2 domain-containing protein. (79 aa)
	SNX3	Sorting nexin 3. (162 aa)
	VPS26B	VPS26, retromer complex component B. (336 aa)
	VPS26A	VPS26, retromer complex component A. (327 aa)

Your Current Organism:

Saimiri boliviensis

NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSBOP00000015324	SNX3	ENSSBOP00000015324	ENSSBOP00000024259	Metallophos_2 domain-containing protein.	Sorting nexin 3.	0.843
ENSSBOP00000015324	VPS26A	ENSSBOP00000015324	ENSSBOP00000027290	Metallophos_2 domain-containing protein.	VPS26, retromer complex component A.	0.971
ENSSBOP00000015324	VPS26B	ENSSBOP00000015324	ENSSBOP00000026004	Metallophos_2 domain-containing protein.	VPS26, retromer complex component B.	0.960
ENSSBOP00000015324	VPS35	ENSSBOP00000015324	ENSSBOP00000013949	Metallophos_2 domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.992
SNX3	ENSSBOP00000015324	ENSSBOP00000024259	ENSSBOP00000015324	Sorting nexin 3.	Metallophos_2 domain-containing protein.	0.843
SNX3	VPS26A	ENSSBOP00000024259	ENSSBOP00000027290	Sorting nexin 3.	VPS26, retromer complex component A.	0.980
SNX3	VPS26B	ENSSBOP00000024259	ENSSBOP00000026004	Sorting nexin 3.	VPS26, retromer complex component B.	0.940
SNX3	VPS35	ENSSBOP00000024259	ENSSBOP00000013949	Sorting nexin 3.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.986
VPS26A	ENSSBOP00000015324	ENSSBOP00000027290	ENSSBOP00000015324	VPS26, retromer complex component A.	Metallophos_2 domain-containing protein.	0.971
VPS26A	SNX3	ENSSBOP00000027290	ENSSBOP00000024259	VPS26, retromer complex component A.	Sorting nexin 3.	0.980
VPS26A	VPS26B	ENSSBOP00000027290	ENSSBOP00000026004	VPS26, retromer complex component A.	VPS26, retromer complex component B.	0.976
VPS26A	VPS35	ENSSBOP00000027290	ENSSBOP00000013949	VPS26, retromer complex component A.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.998
VPS26B	ENSSBOP00000015324	ENSSBOP00000026004	ENSSBOP00000015324	VPS26, retromer complex component B.	Metallophos_2 domain-containing protein.	0.960
VPS26B	SNX3	ENSSBOP00000026004	ENSSBOP00000024259	VPS26, retromer complex component B.	Sorting nexin 3.	0.940
VPS26B	VPS26A	ENSSBOP00000026004	ENSSBOP00000027290	VPS26, retromer complex component B.	VPS26, retromer complex component A.	0.976
VPS26B	VPS35	ENSSBOP00000026004	ENSSBOP00000013949	VPS26, retromer complex component B.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.992
VPS35	ENSSBOP00000015324	ENSSBOP00000013949	ENSSBOP00000015324	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	Metallophos_2 domain-containing protein.	0.992
VPS35	SNX3	ENSSBOP00000013949	ENSSBOP00000024259	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	Sorting nexin 3.	0.986
VPS35	VPS26A	ENSSBOP00000013949	ENSSBOP00000027290	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	VPS26, retromer complex component A.	0.998
VPS35	VPS26B	ENSSBOP00000013949	ENSSBOP00000026004	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	VPS26, retromer complex component B.	0.992