STRINGSTRING
COL5A1 COL5A1 COL11A1 COL11A1 COL5A3 COL5A3 COL5A2 COL5A2 COL2A1 COL2A1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
COL5A1Collagen type V alpha 1 chain. (1809 aa)
COL11A1Collagen type XI alpha 1 chain. (1817 aa)
COL5A3Collagen type V alpha 3 chain. (1509 aa)
COL5A2Collagen type V alpha 2 chain. (1499 aa)
COL2A1Collagen type II alpha 1 chain. (1487 aa)
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.