STRINGSTRING
PLOD3 PLOD3 PLOD1 PLOD1 COL6A5 COL6A5 COLGALT2 COLGALT2 COLGALT1 COLGALT1 COL8A1 COL8A1 COL8A2 COL8A2 COL6A6 COL6A6 PLOD2 PLOD2 COL13A1 COL13A1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PLOD3Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3. (736 aa)
PLOD1Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1. (644 aa)
COL6A5Collagen type VI alpha 5 chain. (2609 aa)
COLGALT2Collagen beta(1-O)galactosyltransferase 2. (538 aa)
COLGALT1Collagen beta(1-O)galactosyltransferase 1. (553 aa)
COL8A1Collagen type VIII alpha 1 chain. (744 aa)
COL8A2Collagen type VIII alpha 2 chain. (703 aa)
COL6A6Collagen type VI alpha 6 chain. (2266 aa)
PLOD2Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2. (758 aa)
COL13A1Collagen type XIII alpha 1 chain. (671 aa)
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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