29 items (Saimiri boliviensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RNF19A	RBR-type E3 ubiquitin transferase. (838 aa)
	RNF19B	Ring finger protein 19B. (436 aa)
	ATPAF1	ATP synthase mitochondrial F1 complex assembly factor 1. (351 aa)
	RNF144A	RBR-type E3 ubiquitin transferase. (292 aa)
	PRKN	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (465 aa)
	MARCHF6	Membrane associated ring-CH-type finger 6. (918 aa)
	TRIM72	Tripartite motif containing 72. (473 aa)
	ANKIB1	RBR-type E3 ubiquitin transferase. (1089 aa)
	RNF144B	RBR-type E3 ubiquitin transferase. (303 aa)
	ZMYM2	Zinc finger MYM-type containing 2. (1353 aa)
	ARIH1	RBR-type E3 ubiquitin transferase. (470 aa)
	ENSSBOP00000001147	UBIQUITIN_CONJUGAT_2 domain-containing protein. (145 aa)
	RNF180	Ring finger protein 180. (592 aa)
	SIAH2	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. (264 aa)
	RNF217	RBR-type E3 ubiquitin transferase. (513 aa)
	PPARA	Peroxisome proliferator activated receptor alpha. (468 aa)
	ENSSBOP00000019712	RBR-type E3 ubiquitin transferase. (484 aa)
	SIAH1	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. (313 aa)
	AUP1	AUP1 lipid droplet regulating VLDL assembly factor. (410 aa)
	MARCHF7	Membrane associated ring-CH-type finger 7. (703 aa)
	SIAH3	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. (269 aa)
	DCUN1D1	DCN1-like protein. (244 aa)
	TRAF6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (537 aa)
	DCUN1D2	DCN1-like protein. (259 aa)
	UBE2V2	UBIQUITIN_CONJUGAT_2 domain-containing protein. (159 aa)
	ENSSBOP00000026884	DCN1-like protein. (97 aa)
	TOLLIP	Toll interacting protein. (242 aa)
	DCUN1D4	DCN1-like protein. (302 aa)
	RNF14	RBR-type E3 ubiquitin transferase. (474 aa)

Your Current Organism:

Saimiri boliviensis

NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARIH1	RNF14	ENSSBOP00000016171	ENSSBOP00000032482	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.473
DCUN1D1	DCUN1D4	ENSSBOP00000023129	ENSSBOP00000027993	DCN1-like protein.	DCN1-like protein.	0.419
DCUN1D4	DCUN1D1	ENSSBOP00000027993	ENSSBOP00000023129	DCN1-like protein.	DCN1-like protein.	0.419
ENSSBOP00000001147	PRKN	ENSSBOP00000001147	ENSSBOP00000005790	UBIQUITIN_CONJUGAT_2 domain-containing protein.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.514
ENSSBOP00000001147	SIAH1	ENSSBOP00000001147	ENSSBOP00000021026	UBIQUITIN_CONJUGAT_2 domain-containing protein.	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	0.607
ENSSBOP00000001147	SIAH2	ENSSBOP00000001147	ENSSBOP00000018178	UBIQUITIN_CONJUGAT_2 domain-containing protein.	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	0.607
ENSSBOP00000001147	TRAF6	ENSSBOP00000001147	ENSSBOP00000024017	UBIQUITIN_CONJUGAT_2 domain-containing protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.604
ENSSBOP00000019712	RNF19A	ENSSBOP00000019712	ENSSBOP00000038123	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.418
ENSSBOP00000019712	RNF19B	ENSSBOP00000019712	ENSSBOP00000038768	RBR-type E3 ubiquitin transferase.	Ring finger protein 19B.	0.418
PRKN	ENSSBOP00000001147	ENSSBOP00000005790	ENSSBOP00000001147	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.514
PRKN	UBE2V2	ENSSBOP00000005790	ENSSBOP00000026176	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.514
RNF14	ARIH1	ENSSBOP00000032482	ENSSBOP00000016171	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.473
RNF14	RNF217	ENSSBOP00000032482	ENSSBOP00000019332	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.473
RNF19A	ENSSBOP00000019712	ENSSBOP00000038123	ENSSBOP00000019712	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.418
RNF19B	ENSSBOP00000019712	ENSSBOP00000038768	ENSSBOP00000019712	Ring finger protein 19B.	RBR-type E3 ubiquitin transferase.	0.418
RNF217	RNF14	ENSSBOP00000019332	ENSSBOP00000032482	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.473
SIAH1	ENSSBOP00000001147	ENSSBOP00000021026	ENSSBOP00000001147	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.607
SIAH1	SIAH2	ENSSBOP00000021026	ENSSBOP00000018178	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	0.714
SIAH1	UBE2V2	ENSSBOP00000021026	ENSSBOP00000026176	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.607
SIAH2	ENSSBOP00000001147	ENSSBOP00000018178	ENSSBOP00000001147	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.607