STRINGSTRING
ENSSBOP00000004781 ENSSBOP00000004781 LSM5-2 LSM5-2 PRPF38A PRPF38A SNRPD2-3 SNRPD2-3 SF3B1 SF3B1 DHX16 DHX16 PRPF6 PRPF6 ENSSBOP00000007591 ENSSBOP00000007591 SNRPD1 SNRPD1 PRPF8 PRPF8 ENSSBOP00000008319 ENSSBOP00000008319 LSM6 LSM6 CWC22 CWC22 EFTUD2 EFTUD2 SF3A1 SF3A1 LSM4 LSM4 ENSSBOP00000011940 ENSSBOP00000011940 RBMX2 RBMX2 MFAP1 MFAP1 SNRPF SNRPF SMU1 SMU1 PRPF4 PRPF4 SNIP1 SNIP1 SNRNP200 SNRNP200 ENSSBOP00000038168 ENSSBOP00000038168 SNRPE SNRPE LSM7 LSM7 ENSSBOP00000037519 ENSSBOP00000037519 LSM5-3 LSM5-3 BUD13 BUD13 ENSSBOP00000034311 ENSSBOP00000034311 PRPF3 PRPF3 SF3A3 SF3A3 ENSSBOP00000032235 ENSSBOP00000032235 ENSSBOP00000031051 ENSSBOP00000031051 ENSSBOP00000028783 ENSSBOP00000028783 SART1 SART1 LSM8 LSM8 ENSSBOP00000012928 ENSSBOP00000012928 SNRPG SNRPG CWC27 CWC27 NHP2L1 NHP2L1 LSM3 LSM3 SNRPD2-4 SNRPD2-4 ENSSBOP00000015732 ENSSBOP00000015732 ENSSBOP00000016408 ENSSBOP00000016408 ENSSBOP00000016443 ENSSBOP00000016443 PHF5A PHF5A ENSSBOP00000017030 ENSSBOP00000017030 ENSSBOP00000000039 ENSSBOP00000000039 SNRPG-2 SNRPG-2 SF3B5 SF3B5 TXNL4A TXNL4A ZMAT2 ZMAT2 SF3A2 SF3A2 SF3B2 SF3B2 IK IK ENSSBOP00000020317 ENSSBOP00000020317 ENSSBOP00000020741 ENSSBOP00000020741 WBP4 WBP4 SNRPB SNRPB ENSSBOP00000022187 ENSSBOP00000022187 ENSSBOP00000023178 ENSSBOP00000023178 PRPF31 PRPF31 ENSSBOP00000024905 ENSSBOP00000024905 SF3B3 SF3B3 SNRPB2 SNRPB2 RNF113B RNF113B SNRPD2 SNRPD2 SNRPA1 SNRPA1 ENSSBOP00000002298 ENSSBOP00000002298 SF3B4 SF3B4 LSM5 LSM5 ENSSBOP00000002458 ENSSBOP00000002458 SNRPD3 SNRPD3 RNF113A RNF113A SNRPD2-2 SNRPD2-2 ENSSBOP00000004243 ENSSBOP00000004243 LSM2 LSM2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSSBOP00000004781Uncharacterized protein. (91 aa)
LSM5-2U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
PRPF38APre-mRNA processing factor 38A. (312 aa)
SNRPD2-3Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (145 aa)
SF3B1Splicing factor 3b subunit 1. (1304 aa)
DHX16DEAH-box helicase 16. (1044 aa)
PRPF6Pre-mRNA processing factor 6. (786 aa)
ENSSBOP00000007591Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (70 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
PRPF8Pre-mRNA processing factor 8. (2335 aa)
ENSSBOP00000008319Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (145 aa)
LSM6Sm domain-containing protein. (80 aa)
CWC22CWC22 spliceosome associated protein homolog. (885 aa)
EFTUD2Elongation factor Tu GTP binding domain containing 2. (977 aa)
SF3A1Splicing factor 3a subunit 1. (773 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (125 aa)
ENSSBOP00000011940Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (71 aa)
RBMX2RNA binding motif protein X-linked 2. (322 aa)
MFAP1Microfibril associated protein 1. (245 aa)
SNRPFSm domain-containing protein. (86 aa)
SMU1SMU1 DNA replication regulator and spliceosomal factor. (513 aa)
PRPF4Pre-mRNA processing factor 4. (459 aa)
SNIP1Smad nuclear interacting protein 1. (328 aa)
SNRNP200Uncharacterized protein. (2136 aa)
ENSSBOP00000038168annotation not available (118 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
LSM7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)
ENSSBOP00000037519Uncharacterized protein. (219 aa)
LSM5-3U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (78 aa)
BUD13BUD13 homolog. (608 aa)
ENSSBOP00000034311Uncharacterized protein. (220 aa)
PRPF3Pre-mRNA processing factor 3. (635 aa)
SF3A3Matrin-type domain-containing protein. (418 aa)
ENSSBOP00000032235Sm domain-containing protein. (78 aa)
ENSSBOP00000031051Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (89 aa)
ENSSBOP00000028783Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (146 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (792 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
ENSSBOP00000012928SEC63 domain-containing protein. (534 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (95 aa)
CWC27CWC27 spliceosome associated cyclophilin. (473 aa)
NHP2L1Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (134 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
SNRPD2-4Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (80 aa)
ENSSBOP00000015732Uncharacterized protein. (48 aa)
ENSSBOP00000016408Sm domain-containing protein. (43 aa)
ENSSBOP00000016443Uncharacterized protein. (86 aa)
PHF5AUncharacterized protein. (107 aa)
ENSSBOP00000017030Uncharacterized protein. (393 aa)
ENSSBOP00000000039Uncharacterized protein. (50 aa)
SNRPG-2Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (97 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
TXNL4AThioredoxin like 4A. (71 aa)
ZMAT2Zinc finger matrin-type 2. (199 aa)
SF3A2Splicing factor 3a subunit 2. (424 aa)
SF3B2Splicing factor 3b subunit 2. (886 aa)
IKIK cytokine. (557 aa)
ENSSBOP00000020317Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (67 aa)
ENSSBOP00000020741Matrin-type domain-containing protein. (425 aa)
WBP4WW domain binding protein 4. (313 aa)
SNRPBSmall nuclear ribonucleoprotein polypeptides B and B1. (321 aa)
ENSSBOP00000022187Sm domain-containing protein. (89 aa)
ENSSBOP00000023178Sm domain-containing protein. (69 aa)
PRPF31Pre-mRNA processing factor 31. (499 aa)
ENSSBOP00000024905Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (67 aa)
SF3B3Splicing factor 3b subunit 3. (1217 aa)
SNRPB2Uncharacterized protein. (225 aa)
RNF113BRing finger protein 113B. (323 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
SNRPA1Small nuclear ribonucleoprotein polypeptide A. (255 aa)
ENSSBOP00000002298Uncharacterized protein. (225 aa)
SF3B4Uncharacterized protein. (424 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
ENSSBOP00000002458Sm domain-containing protein. (86 aa)
SNRPD3Sm domain-containing protein. (270 aa)
RNF113ARing finger protein 113A. (343 aa)
SNRPD2-2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
ENSSBOP00000004243RRM domain-containing protein. (298 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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