(32 nodes) C1q domain network (Saimiri boliviensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OTOL1	Otolin 1. (471 aa)
	CAPRIN2	Caprin family member 2. (1073 aa)
	CBLN1	Cerebellin 1 precursor. (184 aa)
	C1QTNF5	C1q and TNF related 5. (243 aa)
	COL8A2	Collagen type VIII alpha 2 chain. (703 aa)
	CBLN4	Cerebellin 4 precursor. (201 aa)
	COL8A1	Collagen type VIII alpha 1 chain. (744 aa)
	C1QTNF1	C1q and TNF related 1. (280 aa)
	C1QTNF7	C1q and TNF related 7. (298 aa)
	C1QL4	Complement C1q like 4. (238 aa)
	C1QTNF2	C1q and TNF related 2. (330 aa)
	C1QTNF4	C1q and TNF related 4. (329 aa)
	CBLN3	Cerebellin 3 precursor. (205 aa)
	C1QTNF9	C1q domain-containing protein. (333 aa)
	ADIPOQ	Adiponectin, C1Q and collagen domain containing. (244 aa)
	C1QC	Complement C1q C chain. (243 aa)
	C1QTNF6	C1q and TNF related 6. (278 aa)
	CBLN2	Cerebellin 2 precursor. (117 aa)
	C1QTNF12	C1q and TNF related 12. (265 aa)
	C1QA	Complement C1q A chain. (245 aa)
	C1QB	Complement C1q B chain. (253 aa)
	C1QL2	Complement C1q like 2. (287 aa)
	COL10A1	Collagen type X alpha 1 chain. (680 aa)
	EMILIN1	Elastin microfibril interfacer 1. (1016 aa)
	C1QTNF3	C1q domain-containing protein. (341 aa)
	C1QL3	Complement C1q like 3. (255 aa)
	MMRN2	Multimerin 2. (949 aa)
	ERFE	Erythroferrone. (344 aa)
	C1QTNF8	C1q and TNF related 8. (247 aa)
	EMILIN2	Elastin microfibril interfacer 2. (1047 aa)
	C1QL1	C1q domain-containing protein. (230 aa)
	MMRN1	Multimerin 1. (1225 aa)

Your Current Organism:

Saimiri boliviensis

NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1QA	C1QB	ENSSBOP00000009040	ENSSBOP00000009903	Complement C1q A chain.	Complement C1q B chain.	0.997
C1QA	C1QC	ENSSBOP00000009040	ENSSBOP00000002351	Complement C1q A chain.	Complement C1q C chain.	0.999
C1QB	C1QA	ENSSBOP00000009903	ENSSBOP00000009040	Complement C1q B chain.	Complement C1q A chain.	0.997
C1QB	C1QC	ENSSBOP00000009903	ENSSBOP00000002351	Complement C1q B chain.	Complement C1q C chain.	0.998
C1QC	C1QA	ENSSBOP00000002351	ENSSBOP00000009040	Complement C1q C chain.	Complement C1q A chain.	0.999
C1QC	C1QB	ENSSBOP00000002351	ENSSBOP00000009903	Complement C1q C chain.	Complement C1q B chain.	0.998
C1QC	C1QTNF3	ENSSBOP00000002351	ENSSBOP00000014157	Complement C1q C chain.	C1q domain-containing protein.	0.414
C1QTNF12	CAPRIN2	ENSSBOP00000006963	ENSSBOP00000024542	C1q and TNF related 12.	Caprin family member 2.	0.491
C1QTNF2	COL8A1	ENSSBOP00000031683	ENSSBOP00000020786	C1q and TNF related 2.	Collagen type VIII alpha 1 chain.	0.401
C1QTNF3	C1QC	ENSSBOP00000014157	ENSSBOP00000002351	C1q domain-containing protein.	Complement C1q C chain.	0.414
C1QTNF5	C1QTNF9	ENSSBOP00000022993	ENSSBOP00000037097	C1q and TNF related 5.	C1q domain-containing protein.	0.424
C1QTNF9	C1QTNF5	ENSSBOP00000037097	ENSSBOP00000022993	C1q domain-containing protein.	C1q and TNF related 5.	0.424
CAPRIN2	C1QTNF12	ENSSBOP00000024542	ENSSBOP00000006963	Caprin family member 2.	C1q and TNF related 12.	0.491
COL10A1	COL8A1	ENSSBOP00000011468	ENSSBOP00000020786	Collagen type X alpha 1 chain.	Collagen type VIII alpha 1 chain.	0.416
COL8A1	C1QTNF2	ENSSBOP00000020786	ENSSBOP00000031683	Collagen type VIII alpha 1 chain.	C1q and TNF related 2.	0.401
COL8A1	COL10A1	ENSSBOP00000020786	ENSSBOP00000011468	Collagen type VIII alpha 1 chain.	Collagen type X alpha 1 chain.	0.416
COL8A1	COL8A2	ENSSBOP00000020786	ENSSBOP00000021648	Collagen type VIII alpha 1 chain.	Collagen type VIII alpha 2 chain.	0.760
COL8A2	COL8A1	ENSSBOP00000021648	ENSSBOP00000020786	Collagen type VIII alpha 2 chain.	Collagen type VIII alpha 1 chain.	0.760