29 items (Saimiri boliviensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PSMB7	Proteasome subunit beta. (277 aa)
	PSMB2	Proteasome subunit beta. (201 aa)
	ENSSBOP00000037817	Proteasome subunit alpha type. (221 aa)
	PSMA1	Proteasome endopeptidase complex. (189 aa)
	ENSSBOP00000035298	Proteasome subunit alpha type. (224 aa)
	ENSSBOP00000034838	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (215 aa)
	PSMA6	Proteasome subunit alpha type. (246 aa)
	PSMB5	Proteasome subunit beta. (283 aa)
	PSMA5	Proteasome subunit alpha type. (241 aa)
	PSMA7	Proteasome endopeptidase complex. (251 aa)
	PSMB1	Proteasome subunit beta. (241 aa)
	PSMB8	Proteasome subunit beta. (308 aa)
	ENSSBOP00000019567	Proteasome subunit beta. (223 aa)
	ENSSBOP00000019441	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (231 aa)
	PSMB6	Proteasome subunit beta. (240 aa)
	PSMA4	Proteasome subunit alpha type. (284 aa)
	ENSSBOP00000015041	Proteasome subunit alpha type. (192 aa)
	PSMD1	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (949 aa)
	PSMD2	26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. (808 aa)
	UBE3A	Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates. (873 aa)
	PSMA8	Proteasome subunit alpha type. (250 aa)
	PSMB3	Proteasome subunit beta. (208 aa)
	ENSSBOP00000011888	Proteasome subunit beta. (198 aa)
	PSMB9	Proteasome subunit beta. (219 aa)
	PSMA3	Proteasome subunit alpha type. (255 aa)
	ENSSBOP00000008066	Proteasome endopeptidase complex. (151 aa)
	ENSSBOP00000006404	Proteasome subunit alpha type. (244 aa)
	PSMA2	Proteasome subunit alpha type. (234 aa)
	PSMB11	Proteasome subunit beta. (304 aa)

Your Current Organism:

Saimiri boliviensis

NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSBOP00000006404	ENSSBOP00000008066	ENSSBOP00000006404	ENSSBOP00000008066	Proteasome subunit alpha type.	Proteasome endopeptidase complex.	0.967
ENSSBOP00000006404	ENSSBOP00000011888	ENSSBOP00000006404	ENSSBOP00000011888	Proteasome subunit alpha type.	Proteasome subunit beta.	0.929
ENSSBOP00000006404	ENSSBOP00000015041	ENSSBOP00000006404	ENSSBOP00000015041	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.964
ENSSBOP00000006404	ENSSBOP00000019441	ENSSBOP00000006404	ENSSBOP00000019441	Proteasome subunit alpha type.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.930
ENSSBOP00000006404	ENSSBOP00000019567	ENSSBOP00000006404	ENSSBOP00000019567	Proteasome subunit alpha type.	Proteasome subunit beta.	0.967
ENSSBOP00000006404	ENSSBOP00000034838	ENSSBOP00000006404	ENSSBOP00000034838	Proteasome subunit alpha type.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.930
ENSSBOP00000006404	ENSSBOP00000035298	ENSSBOP00000006404	ENSSBOP00000035298	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.967
ENSSBOP00000006404	ENSSBOP00000037817	ENSSBOP00000006404	ENSSBOP00000037817	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.966
ENSSBOP00000006404	PSMA2	ENSSBOP00000006404	ENSSBOP00000006135	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.967
ENSSBOP00000006404	PSMA3	ENSSBOP00000006404	ENSSBOP00000009379	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.967
ENSSBOP00000006404	PSMA4	ENSSBOP00000006404	ENSSBOP00000015801	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.964
ENSSBOP00000006404	PSMA5	ENSSBOP00000006404	ENSSBOP00000027534	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.966
ENSSBOP00000006404	PSMA6	ENSSBOP00000006404	ENSSBOP00000029621	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.930
ENSSBOP00000006404	PSMA7	ENSSBOP00000006404	ENSSBOP00000027225	Proteasome subunit alpha type.	Proteasome endopeptidase complex.	0.963
ENSSBOP00000006404	PSMA8	ENSSBOP00000006404	ENSSBOP00000012520	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.963
ENSSBOP00000006404	PSMB1	ENSSBOP00000006404	ENSSBOP00000025555	Proteasome subunit alpha type.	Proteasome subunit beta.	0.983
ENSSBOP00000006404	PSMB11	ENSSBOP00000006404	ENSSBOP00000001688	Proteasome subunit alpha type.	Proteasome subunit beta.	0.903
ENSSBOP00000006404	PSMB2	ENSSBOP00000006404	ENSSBOP00000038551	Proteasome subunit alpha type.	Proteasome subunit beta.	0.967
ENSSBOP00000006404	PSMB3	ENSSBOP00000006404	ENSSBOP00000012252	Proteasome subunit alpha type.	Proteasome subunit beta.	0.929
ENSSBOP00000006404	PSMB5	ENSSBOP00000006404	ENSSBOP00000028253	Proteasome subunit alpha type.	Proteasome subunit beta.	0.953