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Ccel_0203 Ccel_0203 Ccel_0374 Ccel_0374 celCCD celCCD Ccel_1139 Ccel_1139 Ccel_1249 Ccel_1249 Ccel_1439 Ccel_1439 Ccel_2109 Ccel_2109 Ccel_2226 Ccel_2226 Ccel_2454 Ccel_2454 Ccel_3410 Ccel_3410
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ccel_0203PFAM: glycoside hydrolase family 3 domain protein; KEGG: cbe:Cbei_4974 glycoside hydrolase, family 3 domain protein. (712 aa)
Ccel_0374TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1; KEGG: amr:AM1_2790 beta-glucosidase. (450 aa)
celCCDGlycoside hydrolase family 5; The biological conversion of cellulose to glucose generally requires three types of hydrolytic enzymes: (1) Endoglucanases which cut internal beta-1,4-glucosidic bonds; (2) Exocellobiohydrolases that cut the disaccharide cellobiose from the non-reducing end of the cellulose polymer chain; (3) Beta-1,4-glucosidases which hydrolyze the cellobiose and other short cello-oligosaccharides to glucose. (584 aa)
Ccel_1139PFAM: glycoside hydrolase family 3 domain protein; KEGG: cbe:Cbei_3765 glycoside hydrolase, family 3 domain protein. (724 aa)
Ccel_1249PFAM: glycoside hydrolase family 9; cellulosome protein dockerin type I; KEGG: cth:Cthe_2761 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 9 (cellulase E) family. (686 aa)
Ccel_1439Glycosyltransferase 36; PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: csc:Csac_1090 glycosyltransferase 36. (784 aa)
Ccel_2109Glycosyltransferase 36; PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: cth:Cthe_0275 cellobiose phosphorylase. (811 aa)
Ccel_2226PFAM: glycoside hydrolase family 9; glycoside hydrolase family 9 domain protein Ig domain protein; KEGG: sus:Acid_2606 cellulase. (591 aa)
Ccel_2454PFAM: glycoside hydrolase family 3 domain protein; KEGG: cpy:Cphy_0220 glycoside hydrolase family 3 protein; Belongs to the glycosyl hydrolase 3 family. (711 aa)
Ccel_3410PFAM: glycoside hydrolase family 3 domain protein; KEGG: acl:ACL_0715 glycosyl hydrolase, family 3. (639 aa)
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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