STRINGSTRING
Ccel_2320 Ccel_2320 Ccel_2221 Ccel_2221 Ccel_2123 Ccel_2123 Ccel_1670 Ccel_1670 glgB glgB Ccel_0141 Ccel_0141 Ccel_0153 Ccel_0153 Ccel_0154 Ccel_0154 Ccel_0203 Ccel_0203 Ccel_0374 Ccel_0374 Ccel_0379 Ccel_0379 Ccel_0428 Ccel_0428 Ccel_0429 Ccel_0429 Ccel_0643 Ccel_0643 Ccel_0649 Ccel_0649 Ccel_0736 Ccel_0736 Ccel_0740 Ccel_0740 man26A man26A celCCD celCCD xyn10A xyn10A Ccel_0992 Ccel_0992 Ccel_1004 Ccel_1004 Ccel_1013 Ccel_1013 Ccel_1036 Ccel_1036 celCCA celCCA Ccel_1111 Ccel_1111 Ccel_1139 Ccel_1139 Ccel_1221 Ccel_1221 Ccel_1230 Ccel_1230 Ccel_1237 Ccel_1237 gal59A gal59A Ccel_1239 Ccel_1239 Ccel_1242 Ccel_1242 Ccel_1255 Ccel_1255 Ccel_1259 Ccel_1259 Ccel_1550 Ccel_1550 Ccel_1551 Ccel_1551 Ccel_1597 Ccel_1597 Ccel_3410 Ccel_3410 Ccel_2893 Ccel_2893 Ccel_2820 Ccel_2820 Ccel_2455 Ccel_2455 Ccel_2454 Ccel_2454 Ccel_2451 Ccel_2451 Ccel_2402 Ccel_2402 Ccel_2337 Ccel_2337 Ccel_2319 Ccel_2319
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ccel_2320PFAM: glycoside hydrolase family 10; S-layer domain protein; Carbohydrate-binding CenC domain protein; Carbohydrate-binding family 9; KEGG: ote:Oter_1101 endo-1,4-beta-xylanase. (1050 aa)
Ccel_2221PFAM: cell wall hydrolase/autolysin; protein of unknown function DUF187; KEGG: bce:BC2392 FenI. (997 aa)
Ccel_2123PFAM: cellulosome protein dockerin type I; glycosyl hydrolase 53 domain protein; KEGG: cth:Cthe_1400 glycosyl hydrolase 53. (425 aa)
Ccel_1670PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: cpe:CPE0147 beta-D-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (598 aa)
glgB1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (742 aa)
Ccel_0141PFAM: glycoside hydrolase family 67; glycosyl hydrolase 67 C-teriminal domain protein; Glycosyl hydrolase 67 middle domain protein; KEGG: gtn:GTNG_1770 alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family. (697 aa)
Ccel_0153PFAM: glycoside hydrolase family 10; KEGG: csc:Csac_0204 glycoside hydrolase family protein. (428 aa)
Ccel_0154PFAM: glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: cpr:CPR_0750 beta-galactosidase. (1030 aa)
Ccel_0203PFAM: glycoside hydrolase family 3 domain protein; KEGG: cbe:Cbei_4974 glycoside hydrolase, family 3 domain protein. (712 aa)
Ccel_0374TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1; KEGG: amr:AM1_2790 beta-glucosidase. (450 aa)
Ccel_0379Protein of unknown function DUF291; PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 5; cellulosome protein dockerin type I; protein of unknown function DUF291; KEGG: cth:Cthe_0821 coagulation factor 5/8 type-like protein. (732 aa)
Ccel_0428PFAM: S-layer domain protein; glycoside hydrolase family 5; Carbohydrate binding family 17/28; KEGG: csc:Csac_0678 cellulase. (930 aa)
Ccel_0429PFAM: PKD domain containing protein; cellulosome protein dockerin type I; KEGG: cth:Cthe_0624 glycoside hydrolase family protein. (861 aa)
Ccel_0643PFAM: S-layer domain protein; glycoside hydrolase family 18; SMART: chitinase II; KEGG: aoe:Clos_1547 glycoside hydrolase family protein. (542 aa)
Ccel_0649PFAM: cellulosome protein dockerin type I; KEGG: cac:CA_P0119 xylan degradation protein. (532 aa)
Ccel_0736PFAM: cellulosome protein dockerin type I; KEGG: cac:CAC0918 non-processive endoglucanase. (424 aa)
Ccel_0740PFAM: glycoside hydrolase family 5; cellulosome protein dockerin type I; KEGG: cth:Cthe_2872 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (534 aa)
man26APFAM: glycoside hydrolase family 26; cellulosome protein dockerin type I; KEGG: cth:Cthe_2811 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 26 family. (577 aa)
celCCDGlycoside hydrolase family 5; The biological conversion of cellulose to glucose generally requires three types of hydrolytic enzymes: (1) Endoglucanases which cut internal beta-1,4-glucosidic bonds; (2) Exocellobiohydrolases that cut the disaccharide cellobiose from the non-reducing end of the cellulose polymer chain; (3) Beta-1,4-glucosidases which hydrolyze the cellobiose and other short cello-oligosaccharides to glucose. (584 aa)
xyn10APFAM: glycoside hydrolase family 10; cellulosome protein dockerin type I; KEGG: hau:Haur_4805 glycoside hydrolase family protein. (423 aa)
Ccel_0992PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 2 sugar binding; KEGG: bth:BT_4151 beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (1056 aa)
Ccel_1004PFAM: glycoside hydrolase family 31; KEGG: bvu:BVU_0491 alpha-glycosidase; Belongs to the glycosyl hydrolase 31 family. (791 aa)
Ccel_1013PFAM: glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: pin:Ping_2019 beta-D-galactosidase. (1033 aa)
Ccel_1036PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: gtn:GTNG_1791 alpha-L-arabinofuranosidase. (501 aa)
celCCAGlycoside hydrolase family 5; The biological conversion of cellulose to glucose generally requires three types of hydrolytic enzymes: (1) Endoglucanases which cut internal beta-1,4-glucosidic bonds; (2) Exocellobiohydrolases that cut the disaccharide cellobiose from the non-reducing end of the cellulose polymer chain; (3) Beta-1,4-glucosidases which hydrolyze the cellobiose and other short cello-oligosaccharides to glucose. (475 aa)
Ccel_1111PFAM: glycoside hydrolase family 18; Peptidoglycan-binding LysM; SMART: chitinase II; KEGG: cno:NT01CX_1510 spore peptidogylcan hydrolase. (426 aa)
Ccel_1139PFAM: glycoside hydrolase family 3 domain protein; KEGG: cbe:Cbei_3765 glycoside hydrolase, family 3 domain protein. (724 aa)
Ccel_1221PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: gtn:GTNG_1791 alpha-L-arabinofuranosidase. (502 aa)
Ccel_1230Carbohydrate binding family 6; PFAM: glycoside hydrolase family 10; cellulosome protein dockerin type I; Carbohydrate binding family 6; SMART: cellulose binding type IV; KEGG: cac:CA_P0116 xylanase. (541 aa)
Ccel_1237Carbohydrate binding family 6; PFAM: glycoside hydrolase clan GH-D; cellulosome protein dockerin type I; Carbohydrate binding family 6; SMART: cellulose binding type IV; KEGG: cak:Caul_2129 alpha-galactosidase. (604 aa)
gal59ACarbohydrate binding family 6; PFAM: cellulosome protein dockerin type I; Carbohydrate binding family 6; SMART: cellulose binding type IV; KEGG: cth:Cthe_2197 carbohydrate-binding family 6 protein. (1122 aa)
Ccel_1239Carbohydrate binding family 6; PFAM: cellulosome protein dockerin type I; Carbohydrate binding family 6; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; SMART: cellulose binding type IV; KEGG: cth:Cthe_2197 carbohydrate-binding family 6 protein; Belongs to the glycosyl hydrolase 2 family. (1015 aa)
Ccel_1242Carbohydrate binding family 6; PFAM: cellulosome protein dockerin type I; Carbohydrate binding family 6; SMART: cellulose binding type IV; KEGG: cth:Cthe_3012 carbohydrate-binding family 6 protein. (629 aa)
Ccel_1255PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: bcl:ABC3371 alpha-L-arabinofuranosidase. (492 aa)
Ccel_1259PFAM: glycoside hydrolase family 39; KEGG: csc:Csac_2409 xylan 1,4-beta-xylosidase. (501 aa)
Ccel_1550PFAM: glycoside hydrolase family 18; cellulosome protein dockerin type I; SMART: chitinase II; KEGG: bcl:ABC0646 chitinase; Belongs to the glycosyl hydrolase 18 family. (482 aa)
Ccel_1551PFAM: glycoside hydrolase family 26; cellulosome protein dockerin type I; KEGG: cth:Cthe_0032 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 26 family. (583 aa)
Ccel_1597PFAM: glycoside hydrolase clan GH-D; cellulosome protein dockerin type I; KEGG: aba:Acid345_1677 alpha-galactosidase. (471 aa)
Ccel_3410PFAM: glycoside hydrolase family 3 domain protein; KEGG: acl:ACL_0715 glycosyl hydrolase, family 3. (639 aa)
Ccel_2893Chitinase II; SMART: leucine-rich repeat-containing protein typical subtype; chitinase II; KEGG: cpy:Cphy_1815 leucine-rich repeat-containing protein. (587 aa)
Ccel_2820KEGG: hmo:HM1_2974 hypothetical protein. (822 aa)
Ccel_2455PFAM: glycoside hydrolase family 31; KEGG: csc:Csac_1354 alpha-xylosidase YicI; Belongs to the glycosyl hydrolase 31 family. (770 aa)
Ccel_2454PFAM: glycoside hydrolase family 3 domain protein; KEGG: cpy:Cphy_0220 glycoside hydrolase family 3 protein; Belongs to the glycosyl hydrolase 3 family. (711 aa)
Ccel_2451PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; KEGG: pmo:Pmob_0829 beta-galactosidase. (686 aa)
Ccel_2402KEGG: cth:Cthe_0051 hypothetical protein. (443 aa)
Ccel_2337PFAM: glycoside hydrolase family 5; cellulosome protein dockerin type I; KEGG: cth:Cthe_0536 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (539 aa)
Ccel_2319PFAM: glycoside hydrolase family 10; S-layer domain protein; Carbohydrate-binding CenC domain protein; Carbohydrate-binding family 9; KEGG: swo:Swol_0293 hypothetical protein. (1495 aa)
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.