STRINGSTRING
Ccel_0974 Ccel_0974 Ccel_0977 Ccel_0977 Ccel_0979 Ccel_0979 Ccel_0980 Ccel_0980 Ccel_2390 Ccel_2390 Ccel_2386 Ccel_2386 Ccel_2384 Ccel_2384 Ccel_2383 Ccel_2383 Ccel_2381 Ccel_2381 Ccel_2378 Ccel_2378 Ccel_2331 Ccel_2331 Ccel_2329 Ccel_2329 Ccel_1217 Ccel_1217 Ccel_0982 Ccel_0982 Ccel_1213 Ccel_1213 Ccel_1210 Ccel_1210 Ccel_1049 Ccel_1049 Ccel_0864 Ccel_0864 Ccel_0965 Ccel_0965
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ccel_0974PFAM: AMP-dependent synthetase and ligase; condensation domain protein; cobalamin B12-binding domain protein; phosphopantetheine-binding; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bwe:BcerKBAB4_1784 amino acid adenylation domain-containing protein. (2142 aa)
Ccel_0977TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Non-ribosomal peptide synthetase; Beta-ketoacyl synthase; KEGG: cyt:cce_3073 peptide synthetase. (3739 aa)
Ccel_0979TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Non-ribosomal peptide synthetase; KEGG: pfo:Pfl01_2265 amino acid adenylation. (1514 aa)
Ccel_0980TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: npu:Npun_CR072 amino acid adenylation domain-containing protein. (2193 aa)
Ccel_2390TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bwe:BcerKBAB4_1782 amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. (1490 aa)
Ccel_2386Amino acid adenylation domain protein; KEGG: ckl:CKL_1733 hybrid nonribosomal peptide synthetase/polyketide synthase; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; cobalamin B12-binding domain protein; phosphopantetheine-binding; SMART: Elongator protein 3/MiaB/NifB; Belongs to the ATP-dependent AMP-binding enzyme family. (1893 aa)
Ccel_2384TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; KEGG: ckl:CKL_1733 hybrid nonribosomal peptide synthetase/polyketide synthase. (2508 aa)
Ccel_2383PFAM: condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; KEGG: ckl:CKL_1731 polyketide synthase. (2006 aa)
Ccel_2381TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Alcohol acetyltransferase; KEGG: mar:MAE_60010 McnC protein. (4196 aa)
Ccel_2378TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; KEGG: bld:BLi00401 lichenysin synthetase A. (3695 aa)
Ccel_2331TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; KEGG: bsu:BSU17180 polyketide synthase of type I. (3235 aa)
Ccel_2329Amino acid adenylation domain protein; TIGRFAM: HAD-superfamily phosphatase, subfamily IIIC; FkbH like protein; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: ava:Ava_1613 non-ribosomal peptide synthase; Belongs to the ATP-dependent AMP-binding enzyme family. (2752 aa)
Ccel_1217PFAM: Alcohol acetyltransferase; KEGG: mac:MA1194 hypothetical protein. (489 aa)
Ccel_0982TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: ava:Ava_4099 non-ribosomal peptide synthase. (2006 aa)
Ccel_1213PFAM: condensation domain protein; Alcohol acetyltransferase; KEGG: mac:MA1194 hypothetical protein. (482 aa)
Ccel_1210KEGG: mac:MA1194 hypothetical protein. (513 aa)
Ccel_1049PFAM: chloramphenicol acetyltransferase; KEGG: cbk:CLL_A2166 chloramphenicol O-acetyltransferase. (212 aa)
Ccel_0864TIGRFAM: amino acid adenylation domain protein; PFAM: alpha/beta hydrolase fold; AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Beta-ketoacyl synthase; KEGG: bay:RBAM_016980 BaeJ. (2063 aa)
Ccel_0965TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bwe:BcerKBAB4_1782 amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. (1506 aa)
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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