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Ccel_3479 Ccel_3479 Ccel_0360 Ccel_0360 Ccel_0939 Ccel_0939 Ccel_0942 Ccel_0942 Ccel_0943 Ccel_0943 Ccel_0949 Ccel_0949 Ccel_0950 Ccel_0950 Ccel_0951 Ccel_0951 Ccel_1057 Ccel_1057 mnmG mnmG Ccel_1058 Ccel_1058 Ccel_1112 Ccel_1112 Ccel_1144 Ccel_1144 Ccel_1203 Ccel_1203 Ccel_1403 Ccel_1403 Ccel_1733 Ccel_1733 Ccel_1778 Ccel_1778 Ccel_1779 Ccel_1779 trmFO trmFO Ccel_2448 Ccel_2448 Ccel_2483 Ccel_2483 Ccel_2545 Ccel_2545 Ccel_2922 Ccel_2922
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ccel_3479L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (534 aa)
Ccel_0360PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cth:Cthe_1945 thioredoxin-disulfide reductase. (291 aa)
Ccel_0939PFAM: amine oxidase; KEGG: cpy:Cphy_1763 FAD dependent oxidoreductase. (496 aa)
Ccel_0942KEGG: cpy:Cphy_3243 hypothetical protein. (457 aa)
Ccel_0943PFAM: FAD dependent oxidoreductase; KEGG: rle:RL3853 putative protein involved in invasion. (457 aa)
Ccel_0949PFAM: FAD dependent oxidoreductase; KEGG: rle:RL3853 putative protein involved in invasion. (457 aa)
Ccel_0950HI0933 family protein; PFAM: glucose-inhibited division protein A; HI0933 family protein; FAD dependent oxidoreductase; KEGG: tbd:Tbd_1475 hypothetical protein. (435 aa)
Ccel_0951KEGG: bcl:ABC3582 hypothetical protein. (432 aa)
Ccel_1057KEGG: cbk:CLL_A1370 pyridine nucleotide-disulphide oxidoreductase domain protein. (426 aa)
mnmGGlucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. (627 aa)
Ccel_1058PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: cbk:CLL_A1369 pyridine nucleotide-disulphide oxidoreductase domain protein. (425 aa)
Ccel_1112PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tte:TTE2486 NADH dehydrogenase, FAD-containing subunit. (669 aa)
Ccel_1144PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SirA family protein; Rhodanese domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: afl:Aflv_0303 multidomain redox protein (NAD(FAD)-dependent oxidoreductase; rhodanese domain; SirA-like redox domain; peroxiredoxin domain); Belongs to the sulfur carrier protein TusA family. (817 aa)
Ccel_1203PFAM: FAD dependent oxidoreductase; KEGG: cth:Cthe_1164 FAD dependent oxidoreductase. (526 aa)
Ccel_1403PFAM: FAD dependent oxidoreductase; KEGG: hmo:HM1_1957 fad dependent oxidoreductase, putative. (466 aa)
Ccel_1733HI0933 family protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; KEGG: cth:Cthe_0708 FAD dependent oxidoreductase. (408 aa)
Ccel_1778PFAM: amine oxidase; KEGG: cpy:Cphy_2915 amine oxidase. (572 aa)
Ccel_1779TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: tex:Teth514_0924 thioredoxin reductase. (308 aa)
trmFOGid protein; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. (436 aa)
Ccel_2448PFAM: Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: nth:Nther_0727 FAD dependent oxidoreductase. (510 aa)
Ccel_2483PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: tme:Tmel_0141 FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (444 aa)
Ccel_2545TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cth:Cthe_0372 sulfide dehydrogenase (flavoprotein) subunit SudA. (464 aa)
Ccel_2922KEGG: lsp:Bsph_2834 hypothetical protein. (625 aa)
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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