STRINGSTRING
Ccel_2348 Ccel_2348 Ccel_2349 Ccel_2349 Ccel_2520 Ccel_2520 Ccel_2521 Ccel_2521
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ccel_2348PFAM: protein of unknown function DUF990; KEGG: cau:Caur_0437 hypothetical protein. (270 aa)
Ccel_2349PFAM: protein of unknown function DUF990; KEGG: fnu:FN0879 ABC transporter integral membrane protein. (269 aa)
Ccel_2520PFAM: protein of unknown function DUF990; KEGG: cpy:Cphy_0980 hypothetical protein. (279 aa)
Ccel_2521PFAM: protein of unknown function DUF990; KEGG: cpy:Cphy_0979 hypothetical protein. (262 aa)
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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