STRINGSTRING
hisC hisC Ccel_0659 Ccel_0659 Ccel_0669 Ccel_0669 Ccel_0870 Ccel_0870 Ccel_0875 Ccel_0875 Ccel_0986 Ccel_0986 Ccel_1042 Ccel_1042 Ccel_1218 Ccel_1218 Ccel_1392 Ccel_1392 Ccel_1701 Ccel_1701 Ccel_1756 Ccel_1756 Ccel_1778 Ccel_1778 Ccel_1965 Ccel_1965 Ccel_2653 Ccel_2653
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hisCTIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class V; aminotransferase class I and II; KEGG: cth:Cthe_2883 histidinol phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (358 aa)
Ccel_0659PFAM: GCN5-related N-acetyltransferase; KEGG: cbf:CLI_3229 acetyltransferase. (172 aa)
Ccel_0669phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (433 aa)
Ccel_0870PFAM: alpha/beta hydrolase fold; KEGG: amt:Amet_0320 alpha/beta hydrolase fold. (248 aa)
Ccel_0875KEGG: rxy:Rxyl_2997 coenzyme F390 synthetase-like protein. (563 aa)
Ccel_0986PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: npu:Npun_R3442 3-hydroxyacyl-CoA dehydrogenase, NAD-binding. (281 aa)
Ccel_1042PFAM: aminotransferase class I and II; KEGG: cdf:CD1549 putative histidinol-phosphate aminotransferase. (362 aa)
Ccel_1218phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (436 aa)
Ccel_1392KEGG: mmp:MMP0314 coenzyme F390 synthetase. (413 aa)
Ccel_1701PFAM: thioesterase superfamily protein; KEGG: cph:Cpha266_1470 hypothetical protein. (142 aa)
Ccel_1756phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (432 aa)
Ccel_1778PFAM: amine oxidase; KEGG: cpy:Cphy_2915 amine oxidase. (572 aa)
Ccel_1965PFAM: aminotransferase class I and II; KEGG: cno:NT01CX_0284 aspartate aminotransferase. (393 aa)
Ccel_2653PFAM: Amidase; KEGG: ana:all7525 amidase. (450 aa)
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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