(5 nodes) Mixed, incl. Fumarase C-terminus, and Pyruvate carboxylase network (Anaerobutyricum hallii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	csdB	4-hydroxyphenylacetate decarboxylase large subunit. (843 aa)
	cfiB_1	2-oxoglutarate carboxylase small subunit. (1154 aa)
	ttdA_2	L(+)-tartrate dehydratase subunit alpha. (299 aa)
	ttdB	L(+)-tartrate dehydratase subunit beta. (208 aa)
	maeB	NADP-dependent malic enzyme. (383 aa)

Your Current Organism:

Anaerobutyricum hallii

NCBI taxonomy Id: 39488
Other names: A. hallii, ATCC 27751, DSM 3353, Eubacterium hallii, VPI B4-27

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cfiB_1	csdB	ERS852450_00534	ERS852450_00450	2-oxoglutarate carboxylase small subunit.	4-hydroxyphenylacetate decarboxylase large subunit.	0.900
cfiB_1	maeB	ERS852450_00534	ERS852450_02784	2-oxoglutarate carboxylase small subunit.	NADP-dependent malic enzyme.	0.945
cfiB_1	ttdA_2	ERS852450_00534	ERS852450_02088	2-oxoglutarate carboxylase small subunit.	L(+)-tartrate dehydratase subunit alpha.	0.822
cfiB_1	ttdB	ERS852450_00534	ERS852450_02089	2-oxoglutarate carboxylase small subunit.	L(+)-tartrate dehydratase subunit beta.	0.822
csdB	cfiB_1	ERS852450_00450	ERS852450_00534	4-hydroxyphenylacetate decarboxylase large subunit.	2-oxoglutarate carboxylase small subunit.	0.900
csdB	maeB	ERS852450_00450	ERS852450_02784	4-hydroxyphenylacetate decarboxylase large subunit.	NADP-dependent malic enzyme.	0.918
csdB	ttdA_2	ERS852450_00450	ERS852450_02088	4-hydroxyphenylacetate decarboxylase large subunit.	L(+)-tartrate dehydratase subunit alpha.	0.804
csdB	ttdB	ERS852450_00450	ERS852450_02089	4-hydroxyphenylacetate decarboxylase large subunit.	L(+)-tartrate dehydratase subunit beta.	0.807
maeB	cfiB_1	ERS852450_02784	ERS852450_00534	NADP-dependent malic enzyme.	2-oxoglutarate carboxylase small subunit.	0.945
maeB	csdB	ERS852450_02784	ERS852450_00450	NADP-dependent malic enzyme.	4-hydroxyphenylacetate decarboxylase large subunit.	0.918
maeB	ttdA_2	ERS852450_02784	ERS852450_02088	NADP-dependent malic enzyme.	L(+)-tartrate dehydratase subunit alpha.	0.850
maeB	ttdB	ERS852450_02784	ERS852450_02089	NADP-dependent malic enzyme.	L(+)-tartrate dehydratase subunit beta.	0.850
ttdA_2	cfiB_1	ERS852450_02088	ERS852450_00534	L(+)-tartrate dehydratase subunit alpha.	2-oxoglutarate carboxylase small subunit.	0.822
ttdA_2	csdB	ERS852450_02088	ERS852450_00450	L(+)-tartrate dehydratase subunit alpha.	4-hydroxyphenylacetate decarboxylase large subunit.	0.804
ttdA_2	maeB	ERS852450_02088	ERS852450_02784	L(+)-tartrate dehydratase subunit alpha.	NADP-dependent malic enzyme.	0.850
ttdA_2	ttdB	ERS852450_02088	ERS852450_02089	L(+)-tartrate dehydratase subunit alpha.	L(+)-tartrate dehydratase subunit beta.	0.999
ttdB	cfiB_1	ERS852450_02089	ERS852450_00534	L(+)-tartrate dehydratase subunit beta.	2-oxoglutarate carboxylase small subunit.	0.822
ttdB	csdB	ERS852450_02089	ERS852450_00450	L(+)-tartrate dehydratase subunit beta.	4-hydroxyphenylacetate decarboxylase large subunit.	0.807
ttdB	maeB	ERS852450_02089	ERS852450_02784	L(+)-tartrate dehydratase subunit beta.	NADP-dependent malic enzyme.	0.850
ttdB	ttdA_2	ERS852450_02089	ERS852450_02088	L(+)-tartrate dehydratase subunit beta.	L(+)-tartrate dehydratase subunit alpha.	0.999