STRINGSTRING
sdhC-2 sdhC-2 sdhD-2 sdhD-2 sdhA-2 sdhA-2 sdhB-2 sdhB-2 sdhB-4 sdhB-4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sdhC-2COG2009: Succinate dehydrogenase/fumarate reductase, cytochrome b subunit, Ralstonia solanacearum; KEGG, K00241. (138 aa)
sdhD-2COG2142: Succinate dehydrogenase, hydrophobic anchor subunit, Ralstonia solanacearum; KEGG, K00242. (122 aa)
sdhA-2COG1053: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, Ralstonia solanacearum; KEGG, K00239. (591 aa)
sdhB-2COG0479: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit, Ralstonia solanacearum; KEGG, K00240. (233 aa)
sdhB-4Succinate dehydrogenase iron-sulfur protein; COG2010: Cytochrome c, mono- and diheme variants, Pseudomonas aeruginosa; truncated cytochrome c oxidase subunit I. (236 aa)
Your Current Organism:
Burkholderia multivorans
NCBI taxonomy Id: 395019
Other names: B. multivorans ATCC 17616, Burkholderia multivorans ATCC 17616, Burkholderia multivorans str. ATCC 17616, Burkholderia multivorans strain ATCC 17616
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