STRINGSTRING
nlpD nlpD BAG43547.1 BAG43547.1 mrcA mrcA mrcA-2 mrcA-2 nlpD-3 nlpD-3 ftsI-3 ftsI-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nlpDLipoprotein; COG0739: Membrane proteins related to metalloendopeptidases, Salmonella typhimurium LT2; KEGG, K06194; NlpD protein. (230 aa)
BAG43547.1Membrane protein; Related to metalloendopeptidases. (389 aa)
mrcAPenicillin-binding protein 1A; COG5009: Membrane carboxypeptidase/penicillin-binding protein, Ralstonia solanacearum; KEGG, K05366. (837 aa)
mrcA-2Penicillin-binding protein 1A; COG5009: Membrane carboxypeptidase/penicillin-binding protein, Ralstonia solanacearum; KEGG, K05366. (795 aa)
nlpD-3Lipoprotein; COG0739: Membrane proteins related to metalloendopeptidases, Ralstonia solanacearum; KEGG, K06194; NlpD protein. (245 aa)
ftsI-3Peptidoglycan glycosyltransferase; COG0744: Membrane carboxypeptidase (penicillin-binding protein), Helicobacter pylori J99; KEGG, K05364. (852 aa)
Your Current Organism:
Burkholderia multivorans
NCBI taxonomy Id: 395019
Other names: B. multivorans ATCC 17616, Burkholderia multivorans ATCC 17616, Burkholderia multivorans str. ATCC 17616, Burkholderia multivorans strain ATCC 17616
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