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rfbD rfbD rfbC rfbC rfbA rfbA rfbB rfbB galE-2 galE-2 manB manB ugd ugd galU galU ugd-2 ugd-2 galU-2 galU-2 rfbB-2 rfbB-2 rfbD-2 rfbD-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rfbDdTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (300 aa)
rfbCdTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (183 aa)
rfbAGlucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (297 aa)
rfbBCOG1088: dTDP-D-glucose 4,6-dehydratase, Ralstonia solanacearum; KEGG, K01710; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (353 aa)
galE-2COG1087: UDP-glucose 4-epimerase, Ralstonia solanacearum; KEGG, K01784; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (340 aa)
manBCOG1109: Phosphomannomutase, Ralstonia solanacearum; KEGG, K01840. (464 aa)
ugdCOG1004: Predicted UDP-glucose 6-dehydrogenase, Ralstonia solanacearum; KEGG, K00012. (466 aa)
galUUTP-glucose-1-phosphate uridylyltransferase; COG1210: UDP-glucose pyrophosphorylase, Ralstonia solanacearum; KEGG, K00963. (294 aa)
ugd-2COG1004: Predicted UDP-glucose 6-dehydrogenase, Ralstonia solanacearum; KEGG, K00012. (470 aa)
galU-2UTP-glucose-1-phosphate uridylyltransferase; COG1210: UDP-glucose pyrophosphorylase, Ralstonia solanacearum; KEGG, K00963. (295 aa)
rfbB-2dTDP-glucose 4,6-dehydratase; COG0451: Nucleoside-diphosphate-sugar epimerases, Sinorhizobium meliloti; KEGG, K01710. (335 aa)
rfbD-2dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (333 aa)
Your Current Organism:
Burkholderia multivorans
NCBI taxonomy Id: 395019
Other names: B. multivorans ATCC 17616, Burkholderia multivorans ATCC 17616, Burkholderia multivorans str. ATCC 17616, Burkholderia multivorans strain ATCC 17616
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