STRINGSTRING
mmsB-5 mmsB-5 otnK otnK fucA fucA gip-2 gip-2 galE-6 galE-6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mmsB-5COG2084: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases, Salmonella typhimurium LT2; KEGG, K00020. (296 aa)
otnKConserved hypothetical protein; Catalyzes the ATP-dependent phosphorylation of 3-oxo- tetronate to 3-oxo-tetronate 4-phosphate. (428 aa)
fucAL-fuculose-phosphate aldolase; COG0235: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases, Sinorhizobium meliloti; KEGG, K01628. (212 aa)
gip-2COG3622: Hydroxypyruvate isomerase, Ralstonia solanacearum; KEGG, K01816; Belongs to the hyi family. (258 aa)
galE-6UDP-glucose 4-epimerase; COG0451: Nucleoside-diphosphate-sugar epimerases, Yersinia pestis; KEGG, K01784. (323 aa)
Your Current Organism:
Burkholderia multivorans
NCBI taxonomy Id: 395019
Other names: B. multivorans ATCC 17616, Burkholderia multivorans ATCC 17616, Burkholderia multivorans str. ATCC 17616, Burkholderia multivorans strain ATCC 17616
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.