Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BAG41986.1 | BAG46248.1 | BMULJ_00001 | BMULJ_04393 | Conserved hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | COG2308: Uncharacterized conserved protein, Pseudomonas aeruginosa. | 0.516 |
| BAG41986.1 | BAG46253.1 | BMULJ_00001 | BMULJ_04398 | Conserved hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | COG2308: Uncharacterized conserved protein, Mesorhizobium loti. | 0.904 |
| BAG41986.1 | gshA | BMULJ_00001 | BMULJ_00086 | Conserved hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | Glutamate-cysteine ligase; COG2918: Gamma-glutamylcysteine synthetase, Pseudomonas aeruginosa; KEGG, K01919; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.958 |
| BAG41986.1 | gshB | BMULJ_00001 | BMULJ_02815 | Conserved hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | COG0189: Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase), Ralstonia solanacearum; KEGG, K01920; Belongs to the prokaryotic GSH synthase family. | 0.964 |
| BAG46248.1 | BAG41986.1 | BMULJ_04393 | BMULJ_00001 | COG2308: Uncharacterized conserved protein, Pseudomonas aeruginosa. | Conserved hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.516 |
| BAG46248.1 | BAG46253.1 | BMULJ_04393 | BMULJ_04398 | COG2308: Uncharacterized conserved protein, Pseudomonas aeruginosa. | COG2308: Uncharacterized conserved protein, Mesorhizobium loti. | 0.713 |
| BAG46248.1 | gshB | BMULJ_04393 | BMULJ_02815 | COG2308: Uncharacterized conserved protein, Pseudomonas aeruginosa. | COG0189: Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase), Ralstonia solanacearum; KEGG, K01920; Belongs to the prokaryotic GSH synthase family. | 0.498 |
| BAG46253.1 | BAG41986.1 | BMULJ_04398 | BMULJ_00001 | COG2308: Uncharacterized conserved protein, Mesorhizobium loti. | Conserved hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.904 |
| BAG46253.1 | BAG46248.1 | BMULJ_04398 | BMULJ_04393 | COG2308: Uncharacterized conserved protein, Mesorhizobium loti. | COG2308: Uncharacterized conserved protein, Pseudomonas aeruginosa. | 0.713 |
| BAG46253.1 | gshB | BMULJ_04398 | BMULJ_02815 | COG2308: Uncharacterized conserved protein, Mesorhizobium loti. | COG0189: Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase), Ralstonia solanacearum; KEGG, K01920; Belongs to the prokaryotic GSH synthase family. | 0.485 |
| ddlA | gshA | BMULJ_00404 | BMULJ_00086 | D-alanine-D-alanine ligase; Cell wall formation. | Glutamate-cysteine ligase; COG2918: Gamma-glutamylcysteine synthetase, Pseudomonas aeruginosa; KEGG, K01919; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.599 |
| ddlA | gshB | BMULJ_00404 | BMULJ_02815 | D-alanine-D-alanine ligase; Cell wall formation. | COG0189: Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase), Ralstonia solanacearum; KEGG, K01920; Belongs to the prokaryotic GSH synthase family. | 0.606 |
| ddlA | mpl | BMULJ_00404 | BMULJ_00462 | D-alanine-D-alanine ligase; Cell wall formation. | UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily. | 0.923 |
| ddlA | murC | BMULJ_00404 | BMULJ_00403 | D-alanine-D-alanine ligase; Cell wall formation. | UDP-N-acetylmuramate-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.999 |
| ddlA | murD | BMULJ_00404 | BMULJ_00400 | D-alanine-D-alanine ligase; Cell wall formation. | UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.996 |
| ddlA | murE | BMULJ_00404 | BMULJ_00397 | D-alanine-D-alanine ligase; Cell wall formation. | UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.974 |
| ddlA | murF | BMULJ_00404 | BMULJ_00398 | D-alanine-D-alanine ligase; Cell wall formation. | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.998 |
| dfp | folC | BMULJ_02479 | BMULJ_03893 | Phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | COG0285: Folylpolyglutamate synthase, Ralstonia solanacearum; KEGG, K01930. | 0.759 |
| dfp | murD | BMULJ_02479 | BMULJ_00400 | Phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.450 |
| dfp | panC | BMULJ_02479 | BMULJ_02406 | Phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.927 |
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