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| | ubiX-2 | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (200 aa) |
| | BAG43979.1 | Cupin superfamily protein; COG2850: Uncharacterized conserved protein, Ralstonia solanacearum. (408 aa) |
| | smc | Chromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1170 aa) |
| | rpsB | COG0052: Ribosomal protein S2, Ralstonia solanacearum; KEGG, K02967; Belongs to the universal ribosomal protein uS2 family. (246 aa) |
| | BAG43883.1 | Conserved hypothetical protein. (225 aa) |
| | BAG43856.1 | COG3195: Uncharacterized protein conserved in bacteria, Ralstonia solanacearum. (173 aa) |
| | alc-2 | COG4266: Allantoicase, Ralstonia solanacearum; KEGG, K01477; Belongs to the allantoicase family. (337 aa) |
| | selO | Conserved hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). (522 aa) |
| | BAG43785.1 | COG3332: Uncharacterized conserved protein, Pseudomonas aeruginosa. (281 aa) |
| | rpsF | Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (124 aa) |
| | priB | Primosomal replication protein N; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family. (99 aa) |
| | rpsR | Small subunit ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (91 aa) |
| | rplI | Large subunit ribosomal protein L9; Binds to the 23S rRNA. (150 aa) |
| | dnaB | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (460 aa) |
| | pdhA | COG1071: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit, Pseudomonas aeruginosa; KEGG, K00161. (327 aa) |
| | rpmE | COG0254: Ribosomal protein L31, Ralstonia solanacearum; KEGG, K02909. (87 aa) |
| | BAG43716.1 | Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (108 aa) |
| | recR | Recombination protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (198 aa) |
| | BAG43641.1 | Putative TetR-family transcriptional regulatory protein. (206 aa) |
| | BAG43630.1 | Conserved hypothetical protein. (143 aa) |
| | BAG43616.1 | Probable glutathione-dependent formaldehyde-activating protein; COG3791: Uncharacterized conserved protein, Salmonella typhimurium LT2; GFA protein. (123 aa) |
| | acrR | TetR/AcrR family acrAB operon repressor; COG1309: Transcriptional regulator, Pseudomonas aeruginosa; KEGG, K03577. (221 aa) |
| | BAG43450.1 | COG1309: Transcriptional regulator, Ralstonia solanacearum. (272 aa) |
| | rplT | Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (119 aa) |
| | rpmI | COG0291: Ribosomal protein L35, Ralstonia solanacearum; KEGG, K02916; Belongs to the bacterial ribosomal protein bL35 family. (65 aa) |
| | etf | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. (557 aa) |
| | BAG43339.1 | Putative bacteriophage protein. (158 aa) |
| | dcm | DNA (cytosine-5-)-methyltransferase; KEGG, K00558. (380 aa) |
| | BAG43323.1 | Putative bacteriophage protein. (435 aa) |
| | BAG43248.1 | Conserved hypothetical protein. (453 aa) |
| | BAG43214.1 | Putative aldolase; COG0235: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases, Pseudomonas aeruginosa. (252 aa) |
| | recO | DNA repair protein; Involved in DNA repair and RecF pathway recombination. (278 aa) |
| | rpmF | COG0333: Ribosomal protein L32, Ralstonia solanacearum; KEGG, K02911; Belongs to the bacterial ribosomal protein bL32 family. (59 aa) |
| | rplS | Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (130 aa) |
| | rimM | 16S rRNA processing protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. (223 aa) |
| | rpsP | COG0228: Ribosomal protein S16, Ralstonia solanacearum; KEGG, K02959; Belongs to the bacterial ribosomal protein bS16 family. (84 aa) |
| | himD | Integration host factor beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (107 aa) |
| | rpsA | Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (570 aa) |
| | gyrA | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (867 aa) |
| | BMULJ_00949 | ISBmu3, terminal inverted repeat. (249 aa) |
| | BAG42772.1 | COG2256: ATPase related to the helicase subunit of the Holliday junction resolvase, Ralstonia solanacearum; KEGG, K07478. (436 aa) |
| | BAG42687.1 | ISBmu1a transposase; OrfB. (262 aa) |
| | BAG42654.1 | Putative isomerase; Contains DSBA-like thioredoxin domain. (212 aa) |
| | BAG42645.1 | Aminotransferase; COG0075: Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase, Vibrio cholerae; KEGG, K00839. (403 aa) |
| | BAG42633.1 | Probable glutathione-dependent formaldehyde-activating protein; COG3791: Uncharacterized conserved protein, Pseudomonas aeruginosa. (136 aa) |
| | miaA | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (325 aa) |
| | BAG42568.1 | COG0526: Thiol-disulfide isomerase and thioredoxins, Ralstonia solanacearum. (139 aa) |
| | recN | DNA repair protein; May be involved in recombinational repair of damaged DNA. (549 aa) |
| | cobO | cob(I)alamin adenosyltransferase; COG2096: Uncharacterized conserved protein, Ralstonia solanacearum; KEGG, K00798; Belongs to the Cob(I)alamin adenosyltransferase family. (183 aa) |
| | fis | COG2901: Factor for inversion stimulation Fis, transcriptional activator, Ralstonia solanacearum; Fis protein; KEGG, K03557; Belongs to the transcriptional regulatory Fis family. (77 aa) |
| | rpsI | COG0103: Ribosomal protein S9, Ralstonia solanacearum; KEGG, K02996; Belongs to the universal ribosomal protein uS9 family. (130 aa) |
| | rplM | Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (142 aa) |
| | gntK | Gluconokinase; COG3265: Gluconate kinase, Ralstonia solanacearum; KEGG, K00851. (167 aa) |
| | alc | COG4266: Allantoicase, Ralstonia solanacearum; KEGG, K01477; Belongs to the allantoicase family. (335 aa) |
| | rpmA | COG0211: Ribosomal protein L27, Ralstonia solanacearum; KEGG, K02899; Belongs to the bacterial ribosomal protein bL27 family. (87 aa) |
| | rplU | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (103 aa) |
| | BAG42333.1 | Hypothetical protein; COG2850: Uncharacterized conserved protein, Neisseria meningitidis MC58. (384 aa) |
| | hemA | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (432 aa) |
| | ubiX | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (198 aa) |
| | BAG42310.1 | COG1309: Transcriptional regulator, Ralstonia solanacearum. (206 aa) |
| | BAG42236.1 | COG1565: Uncharacterized conserved protein, Ralstonia solanacearum. (396 aa) |
| | ttk | COG1309: Transcriptional regulator, Ralstonia solanacearum; KEGG, K05501. (221 aa) |
| | ptpS | COG0720: 6-pyruvoyl-tetrahydropterin synthase, Ralstonia solanacearum; KEGG, K01737. (150 aa) |
| | topB | COG0550: Topoisomerase IA, Ralstonia solanacearum; KEGG, K01862. (865 aa) |
| | phnW | 2-aminoethylphosphonate-pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily. (376 aa) |
| | rpmH | Large subunit ribosomal protein L34; KEGG, K02914; Belongs to the bacterial ribosomal protein bL34 family. (44 aa) |
| | gyrB | DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (824 aa) |
| | BAG42047.1 | Hypothetical protein; COG4127: Uncharacterized conserved protein, Caulobacter vibrioides. (346 aa) |
| | rplW | Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (104 aa) |
| | rplD | Large subunit ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. (206 aa) |
| | rplC | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (216 aa) |
| | rpsJ | Small subunit ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa) |
| | rpsG | Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | rpsL | Small subunit ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. (126 aa) |
| | recQ | COG0514: Superfamily II DNA helicase, Ralstonia solanacearum; KEGG, K03654; RecQ protein. (615 aa) |
| | rplL | Large subunit ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (124 aa) |
| | rplJ | Large subunit ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (165 aa) |
| | rplA | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (232 aa) |
| | rplK | Large subunit ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (143 aa) |
| | BAG44913.1 | COG1309: Transcriptional regulator, Ralstonia solanacearum. (201 aa) |
| | BAG44946.1 | Conserved hypothetical protein. (219 aa) |
| | rpsU | COG0828: Ribosomal protein S21, Ralstonia solanacearum; KEGG, K02970; Belongs to the bacterial ribosomal protein bS21 family. (70 aa) |
| | eutC | COG4302: Ethanolamine ammonia-lyase, small subunit, Ralstonia solanacearum; KEGG, K03736; Belongs to the EutC family. (268 aa) |
| | eutB | COG4303: Ethanolamine ammonia-lyase, large subunit, Ralstonia solanacearum; KEGG, K03735. (465 aa) |
| | BAG45023.1 | TetR family transcriptional regulator. (222 aa) |
| | priA | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (757 aa) |
| | parB1 | Chromosome partitioning protein; COG1475: Predicted transcriptional regulators, Ralstonia solanacearum; KEGG, K03497; ParB1 protein; Belongs to the ParB family. (297 aa) |
| | BAG45059.1 | COG1437: Adenylate cyclase, class 2 (thermophilic), Ralstonia solanacearum. (177 aa) |
| | phhB | COG2154: Pterin-4a-carbinolamine dehydratase, Ralstonia solanacearum; KEGG, K01724. (102 aa) |
| | BAG45066.1 | Conserved hypothetical protein; COG2940: Proteins containing SET domain, Ralstonia solanacearum; KEGG, K07117. (177 aa) |
| | BAG45076.1 | COG1309: Transcriptional regulator, Nostoc sp. PCC 7120. (208 aa) |
| | polB | COG0417: DNA polymerase elongation subunit (family B), Pseudomonas aeruginosa; KEGG, K02336. (791 aa) |
| | BAG45195.1 | Predicted enzyme of the cupin superfamily. (114 aa) |
| | BAG45277.1 | COG2513: PEP phosphonomutase and related enzymes, Sinorhizobium meliloti. (253 aa) |
| | paaH-2 | COG1250: 3-hydroxyacyl-CoA dehydrogenase, Halobacterium sp. NRC-1; KEGG, K00074. (336 aa) |
| | BAG45348.1 | TetR family transcriptional regulator. (220 aa) |
| | BAG45378.1 | TetR family transcriptional regulator. (217 aa) |
| | BAG45513.1 | Probable bacteriophage protein. (931 aa) |
| | rpsU-2 | COG0828: Ribosomal protein S21, Neisseria meningitidis Z2491; KEGG, K02970; Belongs to the bacterial ribosomal protein bS21 family. (70 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (622 aa) |
| | BAG45591.1 | ISBmu3 transposase; OrfB. (249 aa) |
| | BAG45596.1 | ISBmu24 transposase. (284 aa) |
| | BAG45642.1 | ISBmu1b transposase; OrfB. (262 aa) |
| | BMULJ_03783 | ISBmu7 transposase, OrfB, interrupted by ISBmu4 insertion, N-terminal part. (494 aa) |
| | BAG45645.1 | IS408a transposase; OrfB; Belongs to the IS21/IS1162 putative ATP-binding protein family. (249 aa) |
| | BMULJ_03794 | Inactivated ISBmu30 transposase OrfA; inactivated OrfA, C-terminal portion. (252 aa) |
| | phrB | COG0415: Deoxyribodipyrimidine photolyase, Mesorhizobium loti; KEGG, K01669; Belongs to the DNA photolyase family. (476 aa) |
| | acrR-3 | COG1309: Transcriptional regulator, Pseudomonas aeruginosa. (215 aa) |
| | BAG45693.1 | COG1309: Transcriptional regulator, Salmonella typhimurium LT2. (283 aa) |
| | BAG45733.1 | COG1834: N-Dimethylarginine dimethylaminohydrolase, Pseudomonas aeruginosa; KEGG, K01482. (252 aa) |
| | recQ-2 | ATP-dependent DNA helicase; KEGG, K03654; RecQ protein. (607 aa) |
| | phnW-3 | Aminotransferase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily. (354 aa) |
| | BAG45898.1 | Phosphoenolpyruvate phosphomutase; COG2513: PEP phosphonomutase and related enzymes, Mesorhizobium loti; KEGG, K01841. (562 aa) |
| | BAG46022.1 | COG3217: Uncharacterized Fe-S protein, Pseudomonas aeruginosa; KEGG, K07140; contains MOSC domain. (288 aa) |
| | BAG46028.1 | Putative aldolase; COG0235: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases, Nostoc sp. PCC 7120. (279 aa) |
| | BAG46110.1 | COG3542: Uncharacterized conserved protein, Ralstonia solanacearum. (168 aa) |
| | BAG46142.1 | COG1309: Transcriptional regulator, Pseudomonas aeruginosa. (206 aa) |
| | paaH-3 | COG1250: 3-hydroxyacyl-CoA dehydrogenase, Ralstonia solanacearum; KEGG, K00074. (518 aa) |
| | BAG46342.1 | Putative aldolase; COG0235: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases, Ralstonia solanacearum. (258 aa) |
| | BAG46385.1 | Conserved hypothetical protein. (250 aa) |
| | BAG46426.1 | Transcriptional regulatory protein. (217 aa) |
| | BAG46500.1 | Bacteriophage protein. (268 aa) |
| | BAG46553.1 | Conserved hypothetical protein. (233 aa) |
| | BAG46635.1 | Putative N-acetyltransferase; COG0454: Histone acetyltransferase HPA2 and related acetyltransferases, Ralstonia solanacearum. (147 aa) |
| | BAG46670.1 | COG2513: PEP phosphonomutase and related enzymes, Ralstonia solanacearum. (286 aa) |
| | BAG46742.1 | Serine-glyoxylate transaminase; COG0075: Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase, Deinococcus radiodurans; KEGG, K00828. (375 aa) |
| | BAG46786.1 | Conserved hypothetical protein; Belongs to the UPF0145 family. (122 aa) |
| | betI | TetR/AcrR family transcriptional repressor of bet genes; Repressor involved in the biosynthesis of the osmoprotectant glycine betaine. It represses transcription of the choline transporter BetT and the genes of BetAB involved in the synthesis of glycine betaine (By similarity). (194 aa) |
| | BAG46895.1 | TetR family transcriptional regulator. (240 aa) |
| | paiB | COG2808: Transcriptional regulator, Ralstonia solanacearum; KEGG, K07734. (212 aa) |
| | BAG46912.1 | COG1309: Transcriptional regulator, Ralstonia solanacearum. (224 aa) |
| | phnW-2 | 2-aminoethylphosphonate-pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily. (369 aa) |
| | BAG47008.1 | COG1309: Transcriptional regulator, Mesorhizobium loti. (211 aa) |
| | BAG47045.1 | Putative 2-hydroxychromene-2-carboxylate isomerase. (212 aa) |
| | prpB | Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. (297 aa) |
| | shc | COG1657: Squalene cyclase, Nostoc sp. PCC 7120; KEGG, K06045. (657 aa) |
| | repA3 | RepA3 protein. (454 aa) |
| | BAG47209.1 | COG1309: Transcriptional regulator, Vibrio cholerae. (212 aa) |
| | BAG47295.1 | COG1309: Transcriptional regulator, Mesorhizobium loti. (188 aa) |
| | sqhC | COG1657: Squalene cyclase, Nostoc sp. PCC 7120; KEGG, K06045. (683 aa) |
| | BAG47366.1 | COG1309: Transcriptional regulator, Sinorhizobium meliloti. (195 aa) |
| | BAG47392.1 | COG3569: Topoisomerase IB, Pseudomonas aeruginosa. (363 aa) |
| | BAG47407.1 | Hypothetical protein. (520 aa) |
| | BAG47461.1 | Metallo-beta-lactamase family protein; COG1236: Predicted exonuclease of the beta-lactamase fold involved in RNA processing, Ralstonia solanacearum; KEGG, K07576. (467 aa) |
| | BAG47474.1 | Conserved hypothetical protein. (169 aa) |
| | phrB-2 | COG0415: Deoxyribodipyrimidine photolyase, Caulobacter vibrioides; KEGG, K01669; Belongs to the DNA photolyase family. (505 aa) |
| | BAG47531.1 | TetR family transcriptional regulator. (188 aa) |
| | BAG47537.1 | COG1309: Transcriptional regulator, Corynebacterium glutamicum. (254 aa) |
| | BMULJ_05739 | IS408 transposase, OrfA, C-terminal part. (249 aa) |
| | BAG47607.1 | ISBmu7a transposase; OrfB. (283 aa) |
| | BAG47608.1 | ISBmu7a transposase; OrfA. (494 aa) |
| | BAG47622.1 | Hypothetical protein. (263 aa) |
| | BAG47665.1 | ISBmu1a transposase; OrfB. (262 aa) |
| | BAG47688.1 | IS408a transposase; OrfB. (249 aa) |
| | BAG47722.1 | Predicted transcriptional regulator; Belongs to the ParB family. (529 aa) |
| | BAG47783.1 | Predicted periplasmic or secreted lipoprotein. (149 aa) |
| | BAG47884.1 | Protein similar to linocin_M18 bacteriocin; COG1659: Uncharacterized protein, linocin/CFP29 homolog, Mycobacterium tuberculosis CDC1551. (271 aa) |
| | rpsU-3 | COG0828: Ribosomal protein S21, Ralstonia solanacearum; KEGG, K02970; Belongs to the bacterial ribosomal protein bS21 family. (70 aa) |
| | paaH-4 | COG1250: 3-hydroxyacyl-CoA dehydrogenase, Ralstonia solanacearum; KEGG, K00074. (284 aa) |
| | etf-2 | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. (557 aa) |
| | rutR | COG1309: Transcriptional regulator, Pseudomonas aeruginosa; KEGG, K09017. (230 aa) |
| | rplB | Large subunit ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (275 aa) |
| | rpsS | Small subunit ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (91 aa) |
| | rplV | Large subunit ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). (109 aa) |
| | rpsC | Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (266 aa) |
| | rplP | Large subunit ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (138 aa) |
| | rpmC | COG0255: Ribosomal protein L29, Ralstonia solanacearum; KEGG, K02904; Belongs to the universal ribosomal protein uL29 family. (64 aa) |
| | rpsQ | Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (90 aa) |
| | rplN | Large subunit ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rplX | Large subunit ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (102 aa) |
| | rplE | Large subunit ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (179 aa) |
| | rpsN | Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa) |
| | rpsH | Small subunit ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (131 aa) |
| | rplF | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (176 aa) |
| | rplR | Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (121 aa) |
| | rpsE | Small subunit ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. (172 aa) |
| | rpmD | COG1841: Ribosomal protein L30/L7E, Ralstonia solanacearum; KEGG, K02907. (60 aa) |
| | rplO | Large subunit ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (144 aa) |
| | rpmJ | Large subunit ribosomal protein L36; KEGG, K02919; Belongs to the bacterial ribosomal protein bL36 family. (38 aa) |
| | rpsM | Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (121 aa) |
| | rpsK | Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (133 aa) |
| | rpsD | Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (207 aa) |
| | rplQ | COG0203: Ribosomal protein L17, Ralstonia solanacearum; KEGG, K02879. (131 aa) |
| | sspB | COG2969: Stringent starvation protein B, Ralstonia solanacearum; KEGG, K03600. (173 aa) |
| | rplY | Large subunit ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (201 aa) |
| | ispE | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (293 aa) |
| | yhbH | Putative sigma54 modulation protein; COG1544: Ribosome-associated protein Y (PSrp-1), Ralstonia solanacearum; KEGG, K05808. (119 aa) |
| | BAG44602.1 | Putative aldolase; COG0235: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases, Caulobacter vibrioides. (257 aa) |
| | BAG44574.1 | COG1309: Transcriptional regulator, Ralstonia solanacearum. (199 aa) |
| | BAG44515.1 | Probable glutathione-dependent formaldehyde-activating protein; COG3791: Uncharacterized conserved protein, Ralstonia solanacearum. (115 aa) |
| | acrR-2 | acrAB operon repressor; COG1309: Transcriptional regulator, Ralstonia solanacearum; KEGG, K03577. (212 aa) |
| | rpsT | Small subunit ribosomal protein S20; Binds directly to 16S ribosomal RNA. (90 aa) |
| | clpS | ATP-dependent Clp protease adaptor protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (104 aa) |
| | ribF | Riboflavin kinase; COG0196: FAD synthase, Ralstonia solanacearum; KEGG, K00861; Belongs to the ribF family. (330 aa) |
| | rpmG | COG0267: Ribosomal protein L33, Ralstonia solanacearum; KEGG, K02913; Belongs to the bacterial ribosomal protein bL33 family. (55 aa) |
| | rpmB | COG0227: Ribosomal protein L28, Ralstonia solanacearum; KEGG, K02902; Belongs to the bacterial ribosomal protein bL28 family. (77 aa) |
| | cbiX | Sirohydrochlorin cobaltochelatase; COG2138: Uncharacterized conserved protein, Ralstonia solanacearum; KEGG, K03795. (126 aa) |
| | holC | COG2927: DNA polymerase III, chi subunit, Ralstonia solanacearum; KEGG, K02339. (138 aa) |
| | BAG44316.1 | COG2947: Uncharacterized conserved protein, Ralstonia solanacearum. (153 aa) |
| | BAG44248.1 | COG1309: Transcriptional regulator, Mesorhizobium loti. (211 aa) |
| | parE | Topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (660 aa) |
| | parC | Topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily. (773 aa) |
| | BAG44207.1 | COG1309: Transcriptional regulator, Ralstonia solanacearum. (210 aa) |
| | nadD | COG1057: Nicotinic acid mononucleotide adenylyltransferase, Ralstonia solanacearum; KEGG, K00969; Belongs to the NadD family. (196 aa) |
| | BAG44158.1 | COG3803: Uncharacterized protein conserved in bacteria, Ralstonia solanacearum. (205 aa) |
| | BAG44154.1 | COG1309: Transcriptional regulator, Ralstonia solanacearum. (244 aa) |
| | rpsO | Small subunit ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. (89 aa) |
| | hrpA | COG1643: HrpA-like helicases, Ralstonia solanacearum; HrpA protein; KEGG, K03578. (1378 aa) |
