STRINGSTRING
rpoS rpoS ahpC ahpC BAG44315.1 BAG44315.1 recA recA rpoN rpoN rpoH rpoH motB motB acnB acnB motB-2 motB-2 osmC osmC acnA acnA ahpF ahpF ahpC-2 ahpC-2 rpoS-2 rpoS-2 acnA-2 acnA-2 rpoN-2 rpoN-2 fecI fecI trxB trxB katG katG oxyR oxyR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rpoSRNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response. (361 aa)
ahpCAlkyl hydroperoxide reductase subunit C; COG0450: Peroxiredoxin, Ralstonia solanacearum; KEGG, K03386. (182 aa)
BAG44315.1Conserved hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. (104 aa)
recARecombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (348 aa)
rpoNRNA polymerase sigma54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (501 aa)
rpoHRNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. (311 aa)
motBChemotaxis MotB protein; COG1360: Flagellar motor protein, Yersinia pestis; KEGG, K02557. (338 aa)
acnBAconitate hydratase 2; COG1049: Aconitase B, Xylella fastidiosa 9a5c; KEGG, K01682; Belongs to the aconitase/IPM isomerase family. (861 aa)
motB-2Chemotaxis MotB protein; COG1360: Flagellar motor protein, Pseudomonas aeruginosa; KEGG, K02557. (219 aa)
osmCOsmotically inducible protein; COG1764: Predicted redox protein, regulator of disulfide bond formation, Ralstonia solanacearum; KEGG, K04063; OsmC protein. (139 aa)
acnAAconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (905 aa)
ahpFCOG3634: Alkyl hydroperoxide reductase, large subunit, Pseudomonas aeruginosa; KEGG, K03387. (532 aa)
ahpC-2Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (187 aa)
rpoS-2RNA polymerase sigma 38 subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (525 aa)
acnA-2Aconitate hydratase 1; COG1048: Aconitase A, Ralstonia solanacearum; KEGG, K01681. (865 aa)
rpoN-2RNA polymerase sigma54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (475 aa)
fecIECF subfamily RNA polymerase sigma-70 factor; COG1595: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog, Pseudomonas aeruginosa; KEGG, K03088; Belongs to the sigma-70 factor family. ECF subfamily. (169 aa)
trxBCOG0492: Thioredoxin reductase, Ralstonia solanacearum; KEGG, K00384. (320 aa)
katGCatalase/peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (728 aa)
oxyRLysR family hydrogen peroxide-inducible genes activator; COG0583: Transcriptional regulator, Ralstonia solanacearum; KEGG, K04761; Belongs to the LysR transcriptional regulatory family. (319 aa)
Your Current Organism:
Burkholderia multivorans
NCBI taxonomy Id: 395019
Other names: B. multivorans ATCC 17616, Burkholderia multivorans ATCC 17616, Burkholderia multivorans str. ATCC 17616, Burkholderia multivorans strain ATCC 17616
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