STRINGSTRING
fis fis miaB miaB hemB hemB rng rng pnp pnp bfr-2 bfr-2 proQ proQ ahcY ahcY hfqS hfqS bfr bfr hfqL hfqL sucA sucA acpP acpP rne rne
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fisCOG2901: Factor for inversion stimulation Fis, transcriptional activator, Ralstonia solanacearum; Fis protein; KEGG, K03557; Belongs to the transcriptional regulatory Fis family. (77 aa)
miaBBifunctional enzyme; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. (457 aa)
hemBPorphobilinogen synthase; COG0113: Delta-aminolevulinic acid dehydratase, Ralstonia solanacearum; KEGG, K01698; Belongs to the ALAD family. (332 aa)
rngCOG1530: Ribonucleases G and E, Ralstonia solanacearum; KEGG, K08301. (490 aa)
pnpPolyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (715 aa)
bfr-2Bacterioferritin; Iron-storage protein. (158 aa)
proQProP effector; COG3109: Activator of osmoprotectant transporter ProP, Pseudomonas aeruginosa; KEGG, K03607. (218 aa)
ahcYAdenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. (472 aa)
hfqSHost factor; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. (79 aa)
bfrCOG2193: Bacterioferritin (cytochrome b1), Pseudomonas aeruginosa; KEGG, K03594. (196 aa)
hfqLHost factor; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. (192 aa)
sucACOG0567: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes, Ralstonia solanacearum; KEGG, K00164. (954 aa)
acpPAcyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. (79 aa)
rneRibonuclease; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. (1054 aa)
Your Current Organism:
Burkholderia multivorans
NCBI taxonomy Id: 395019
Other names: B. multivorans ATCC 17616, Burkholderia multivorans ATCC 17616, Burkholderia multivorans str. ATCC 17616, Burkholderia multivorans strain ATCC 17616
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.