STRINGSTRING
Lcho_0453 Lcho_0453 Lcho_2560 Lcho_2560 Lcho_2920 Lcho_2920 Lcho_3809 Lcho_3809 Lcho_4234 Lcho_4234 Lcho_4355 Lcho_4355
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Lcho_0453PFAM: N-acylglucosamine 2-epimerase; KEGG: bpd:BURPS668_0335 N-acylglucosamine 2-epimerase family protein. (412 aa)
Lcho_2560Gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: ajs:Ajs_1042 gamma-glutamyltransferase. (599 aa)
Lcho_2920ChaC family protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. (242 aa)
Lcho_3809Gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: bxe:Bxe_B1050 gamma-glutamyltransferase. (532 aa)
Lcho_4234PFAM: VanZ family protein; KEGG: mpt:Mpe_A0308 hypothetical protein. (359 aa)
Lcho_4355Gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: tth:TTC0403 gamma-glutamyltranspeptidase. (494 aa)
Your Current Organism:
Leptothrix cholodnii
NCBI taxonomy Id: 395495
Other names: L. cholodnii SP-6, Leptothrix cholodnii SP-6, Leptothrix cholodnii str. SP-6, Leptothrix cholodnii strain SP-6
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