STRINGSTRING
SED12876.1 SED12876.1 rlpA-2 rlpA-2 SED06931.1 SED06931.1 bamE bamE SED05180.1 SED05180.1 SED03796.1 SED03796.1 SED03584.1 SED03584.1 bamD bamD lptE lptE SEC98563.1 SEC98563.1 rlpA rlpA SEC98354.1 SEC98354.1 SEC97757.1 SEC97757.1 lptD lptD SEC87926.1 SEC87926.1 mtgA mtgA mutM mutM SEC80605.1 SEC80605.1 SEC70522.1 SEC70522.1 metN-2 metN-2 SEC67065.1 SEC67065.1 SEC66584.1 SEC66584.1 SEC65494.1 SEC65494.1 metN metN SEC60862.1 SEC60862.1 SEC58883.1 SEC58883.1 SEC58841.1 SEC58841.1 SEC58806.1 SEC58806.1 SEC58682.1 SEC58682.1 SEC57920.1 SEC57920.1 SEC55777.1 SEC55777.1 SEC55061.1 SEC55061.1 SEC54592.1 SEC54592.1 SEC50634.1 SEC50634.1 lolB lolB SEC44525.1 SEC44525.1 SEC42860.1 SEC42860.1 SEC42007.1 SEC42007.1 SEC41033.1 SEC41033.1 SEC40441.1 SEC40441.1 SEB62092.1 SEB62092.1 SEB62210.1 SEB62210.1 SEB62746.1 SEB62746.1 SEB62780.1 SEB62780.1 SEB63965.1 SEB63965.1 SEB63997.1 SEB63997.1 SEB64366.1 SEB64366.1 SEB65086.1 SEB65086.1 SEB65832.1 SEB65832.1 SEB65874.1 SEB65874.1 SEB67000.1 SEB67000.1 SEB68333.1 SEB68333.1 SEB68697.1 SEB68697.1 SEB69527.1 SEB69527.1 SEB69701.1 SEB69701.1 SEB69799.1 SEB69799.1 SEB69958.1 SEB69958.1 SEB71297.1 SEB71297.1 SEB71367.1 SEB71367.1 SEB71910.1 SEB71910.1 SEB78127.1 SEB78127.1 SEB89356.1 SEB89356.1 SEB89583.1 SEB89583.1 SEB89840.1 SEB89840.1 SEB90230.1 SEB90230.1 SEB91141.1 SEB91141.1 SEB92124.1 SEB92124.1 SEB93048.1 SEB93048.1 SEB93079.1 SEB93079.1 SEB93116.1 SEB93116.1 SEB93281.1 SEB93281.1 SEB93806.1 SEB93806.1 SEB94641.1 SEB94641.1 SEB96894.1 SEB96894.1 SEC04344.1 SEC04344.1 fadA fadA SEC07199.1 SEC07199.1 SEC10967.1 SEC10967.1 SEC12195.1 SEC12195.1 SEC13391.1 SEC13391.1 SEC14074.1 SEC14074.1 SEC20966.1 SEC20966.1 SEC21639.1 SEC21639.1 SEC23035.1 SEC23035.1 SEC23595.1 SEC23595.1 SEC25406.1 SEC25406.1 SEC28854.1 SEC28854.1 SEC31814.1 SEC31814.1 pal pal rnfG rnfG SEC39387.1 SEC39387.1 SEC40336.1 SEC40336.1 SEE01009.1 SEE01009.1 SED72568.1 SED72568.1 SED69302.1 SED69302.1 SED65212.1 SED65212.1 SED59939.1 SED59939.1 SED59027.1 SED59027.1 SED57625.1 SED57625.1 SED57151.1 SED57151.1 SED55214.1 SED55214.1 SED53998.1 SED53998.1 SED53865.1 SED53865.1 SED47905.1 SED47905.1 SED46811.1 SED46811.1 SED46721.1 SED46721.1 SED43582.1 SED43582.1 SED42714.1 SED42714.1 SED41959.1 SED41959.1 SED41424.1 SED41424.1 SED40958.1 SED40958.1 SED37640.1 SED37640.1 SED36550.1 SED36550.1 SED36108.1 SED36108.1 SED34881.1 SED34881.1 SED33691.1 SED33691.1 SED26166.1 SED26166.1 SED24593.1 SED24593.1 SED22119.1 SED22119.1 SED21335.1 SED21335.1 kdsA kdsA bamA bamA SED17383.1 SED17383.1 SED16184.1 SED16184.1 SED15506.1 SED15506.1 SED15303.1 SED15303.1 mltF mltF SED13596.1 SED13596.1 bamB bamB SED10104.1 SED10104.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SED12876.1Uncharacterized conserved protein YcfJ, contains glycine zipper 2TM domain. (183 aa)
rlpA-2Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (124 aa)
SED06931.1Catecholate siderophore receptor. (772 aa)
bamEBeta-barrel assembly machine subunit BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (175 aa)
SED05180.1Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. (343 aa)
SED03796.1Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). (774 aa)
SED03584.1Aspartate/methionine/tyrosine aminotransferase. (390 aa)
bamDBeta-barrel assembly machine subunit BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (340 aa)
lptELPS-assembly lipoprotein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. (201 aa)
SEC98563.1Membrane-bound lytic murein transglycosylase B. (440 aa)
rlpARare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (335 aa)
SEC98354.1Membrane-bound lytic murein transglycosylase B. (336 aa)
SEC97757.1Uncharacterized conserved protein YceK. (94 aa)
lptDLPS-assembly protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (932 aa)
SEC87926.1Membrane-bound lytic murein transglycosylase A; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. (394 aa)
mtgAMonofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. (240 aa)
mutMDNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. (270 aa)
SEC80605.1Peptidylprolyl isomerase/FKBP-type peptidyl-prolyl cis-trans isomerase FklB. (221 aa)
SEC70522.1N-acetylmuramoyl-L-alanine amidase. (259 aa)
metN-2D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (335 aa)
SEC67065.1Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. (483 aa)
SEC66584.1Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. (482 aa)
SEC65494.1Iron complex outermembrane recepter protein. (790 aa)
metND-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (377 aa)
SEC60862.1Apolipoprotein D and lipocalin family protein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. (189 aa)
SEC58883.1Penicillin-binding protein 1A. (813 aa)
SEC58841.1Type IV pilus assembly protein PilM. (353 aa)
SEC58806.1Type IV pilus assembly protein PilN. (188 aa)
SEC58682.1Type IV pilus assembly protein PilQ. (690 aa)
SEC57920.1Type II secretion system protein L (GspL); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (368 aa)
SEC55777.1Uncharacterized conserved protein YceK. (131 aa)
SEC55061.1Outer membrane protein. (478 aa)
SEC54592.1Hypothetical protein. (237 aa)
SEC50634.1Iron complex outermembrane recepter protein. (705 aa)
lolBOuter membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. (205 aa)
SEC44525.1Lipid A 3-O-deacylase; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family. (172 aa)
SEC42860.1Outer membrane protein OmpA. (242 aa)
SEC42007.1Hypothetical protein. (603 aa)
SEC41033.1Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. (499 aa)
SEC40441.1Alginate export porin. (493 aa)
SEB62092.1acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (383 aa)
SEB62210.1acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
SEB62746.1Acetone monooxygenase. (549 aa)
SEB62780.1Putative flavoprotein involved in K+ transport. (433 aa)
SEB63965.1Arginine:pyruvate transaminase. (667 aa)
SEB63997.1Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. (517 aa)
SEB64366.1L-aspartate aminotransferase apoenzyme. (396 aa)
SEB65086.1Hypothetical protein. (180 aa)
SEB65832.1acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
SEB65874.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (253 aa)
SEB67000.1Arginine:pyruvate transaminase. (395 aa)
SEB68333.1Iron complex outermembrane recepter protein. (746 aa)
SEB68697.1Iron complex outermembrane recepter protein. (804 aa)
SEB69527.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (258 aa)
SEB69701.1Long-chain fatty acid transport protein. (422 aa)
SEB69799.1Outer membrane lipoprotein SlyB. (151 aa)
SEB69958.1Protein of unknown function. (84 aa)
SEB71297.1Iron complex outermembrane recepter protein. (695 aa)
SEB71367.1Iron complex outermembrane recepter protein. (740 aa)
SEB71910.1Iron complex outermembrane recepter protein. (759 aa)
SEB78127.1Beta-barrel assembly machine subunit BamE. (116 aa)
SEB89356.1Polysaccharide export outer membrane protein. (181 aa)
SEB89583.1Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. (490 aa)
SEB89840.1Predicted protein. (156 aa)
SEB90230.1Long-chain fatty acid transport protein. (422 aa)
SEB91141.1acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
SEB92124.1Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. (484 aa)
SEB93048.1Curli production assembly/transport component CsgG. (287 aa)
SEB93079.1Curli production assembly/transport component CsgF. (139 aa)
SEB93116.1Curli production assembly/transport component CsgE. (129 aa)
SEB93281.1General secretion pathway protein D; Belongs to the bacterial secretin family. (611 aa)
SEB93806.1Protein of unknown function. (202 aa)
SEB94641.1Hypothetical protein. (310 aa)
SEB96894.1Trimethylamine monooxygenase. (455 aa)
SEC04344.1Pilus assembly protein FimV. (876 aa)
fadA3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (391 aa)
SEC07199.1Soluble lytic murein transglycosylase. (642 aa)
SEC10967.1acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
SEC12195.1Putative urate catabolism protein. (308 aa)
SEC13391.1FKBP-type peptidyl-prolyl cis-trans isomerase FklB. (237 aa)
SEC14074.1Long-chain fatty acid transport protein. (428 aa)
SEC20966.1Hypothetical protein. (287 aa)
SEC21639.1Pilus assembly protein FimV. (437 aa)
SEC23035.1Iron complex outermembrane recepter protein. (707 aa)
SEC23595.1Putative porin. (443 aa)
SEC25406.1Hypothetical protein. (200 aa)
SEC28854.1Uncharacterized membrane protein YkoI. (101 aa)
SEC31814.1Hemoglobin/transferrin/lactoferrin receptor protein. (862 aa)
palPeptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (165 aa)
rnfGElectron transport complex protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. (203 aa)
SEC39387.1Outer membrane usher protein FimD/PapC. (825 aa)
SEC40336.1Alginate biosynthesis protein Alg44. (389 aa)
SEE01009.1Copper resistance protein B; Manually curated. (343 aa)
SED72568.1Outer membrane protein, multidrug efflux system. (473 aa)
SED69302.1Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. (493 aa)
SED65212.1acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa)
SED59939.1Peptidylprolyl isomerase. (112 aa)
SED59027.1acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
SED57625.1Putative flavoprotein involved in K+ transport. (607 aa)
SED57151.1Putative flavoprotein involved in K+ transport. (436 aa)
SED55214.1Hypothetical protein. (262 aa)
SED53998.1Imipenem/basic amino acid-specific outer membrane pore. (441 aa)
SED53865.1Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. (373 aa)
SED47905.1Type II/III secretion system short domain-containing protein. (253 aa)
SED46811.1Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. (489 aa)
SED46721.1Autotransporter secretion outer membrane protein TamA. (575 aa)
SED43582.1Protein of unknown function. (363 aa)
SED42714.1Uncharacterized membrane protein YkoI. (106 aa)
SED41959.13-oxoadipyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (403 aa)
SED41424.1acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
SED40958.1Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid. (820 aa)
SED37640.1Alanine-synthesizing transaminase. (403 aa)
SED36550.1Protein of unknown function. (83 aa)
SED36108.1Membrane-bound lytic murein transglycosylase MltF; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding protein 3 family. (473 aa)
SED34881.1Fuc2NAc and GlcNAc transferase. (336 aa)
SED33691.1acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
SED26166.1Beta-barrel assembly machine subunit BamC. (371 aa)
SED24593.1Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. (359 aa)
SED22119.13-oxoadipyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
SED21335.1Outer membrane lipoprotein SlyB. (154 aa)
kdsA2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Belongs to the KdsA family. (281 aa)
bamABeta-barrel assembly machine subunit BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (792 aa)
SED17383.1Hypothetical protein. (304 aa)
SED16184.1Outer membrane scaffolding protein for murein synthesis, MipA/OmpV family. (253 aa)
SED15506.1Membrane carboxypeptidase (penicillin-binding protein). (1039 aa)
SED15303.1Outer membrane usher protein FimD/PapC. (840 aa)
mltFMembrane-bound lytic murein transglycosylase F; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. (486 aa)
SED13596.12-keto-4-methylthiobutyrate aminotransferase apoenzyme. (382 aa)
bamBBeta-barrel assembly machine subunit BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (401 aa)
SED10104.1N-acetyl-anhydromuramyl-L-alanine amidase AmpD. (256 aa)
Your Current Organism:
Pseudomonas mohnii
NCBI taxonomy Id: 395600
Other names: Arthrobacter sp. BDR2P2B2-M, CCUG 53115, DSM 18327, P. mohnii, Pseudomonas mohnii Camara et al. 2007, strain IpA-2
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