Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEC08916.1 | SEC58883.1 | SAMN05216205_1446 | SAMN05216205_2715 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | Penicillin-binding protein 1A. | 0.762 |
| SEC08916.1 | SEC98411.1 | SAMN05216205_1446 | SAMN05216205_3828 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | Penicillin-binding protein 6. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | 0.732 |
| SEC08916.1 | SED03796.1 | SAMN05216205_1446 | SAMN05216205_4010 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.759 |
| SEC08916.1 | SED15506.1 | SAMN05216205_1446 | SAMN05216205_4375 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | Membrane carboxypeptidase (penicillin-binding protein). | 0.629 |
| SEC08916.1 | SED21214.1 | SAMN05216205_1446 | SAMN05216205_4554 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | CubicO group peptidase, beta-lactamase class C family. | 0.655 |
| SEC08916.1 | SED22903.1 | SAMN05216205_1446 | SAMN05216205_4610 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | CubicO group peptidase, beta-lactamase class C family. | 0.596 |
| SEC08916.1 | SED43979.1 | SAMN05216205_1446 | SAMN05216205_5233 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | Beta-lactamase class C. | 0.596 |
| SEC08916.1 | SED45097.1 | SAMN05216205_1446 | SAMN05216205_5265 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | murein-DD-endopeptidase. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | 0.680 |
| SEC08916.1 | ftsI | SAMN05216205_1446 | SAMN05216205_2273 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | Peptidoglycan synthetase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.791 |
| SEC08916.1 | mrdA | SAMN05216205_1446 | SAMN05216205_3824 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | Peptidoglycan glycosyltransferase /cell elongation-specific peptidoglycan D,D-transpeptidase; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.747 |
| SEC08916.1 | mrdA-2 | SAMN05216205_1446 | SAMN05216205_5134 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | Peptidoglycan glycosyltransferase /cell elongation-specific peptidoglycan D,D-transpeptidase; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.740 |
| SEC58883.1 | SEC08916.1 | SAMN05216205_2715 | SAMN05216205_1446 | Penicillin-binding protein 1A. | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | 0.762 |
| SEC58883.1 | SEC98411.1 | SAMN05216205_2715 | SAMN05216205_3828 | Penicillin-binding protein 1A. | Penicillin-binding protein 6. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | 0.733 |
| SEC58883.1 | SED03796.1 | SAMN05216205_2715 | SAMN05216205_4010 | Penicillin-binding protein 1A. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.865 |
| SEC58883.1 | SED15506.1 | SAMN05216205_2715 | SAMN05216205_4375 | Penicillin-binding protein 1A. | Membrane carboxypeptidase (penicillin-binding protein). | 0.698 |
| SEC58883.1 | SED21214.1 | SAMN05216205_2715 | SAMN05216205_4554 | Penicillin-binding protein 1A. | CubicO group peptidase, beta-lactamase class C family. | 0.621 |
| SEC58883.1 | SED22903.1 | SAMN05216205_2715 | SAMN05216205_4610 | Penicillin-binding protein 1A. | CubicO group peptidase, beta-lactamase class C family. | 0.621 |
| SEC58883.1 | SED43979.1 | SAMN05216205_2715 | SAMN05216205_5233 | Penicillin-binding protein 1A. | Beta-lactamase class C. | 0.664 |
| SEC58883.1 | SED45097.1 | SAMN05216205_2715 | SAMN05216205_5265 | Penicillin-binding protein 1A. | murein-DD-endopeptidase. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | 0.724 |
| SEC58883.1 | ftsI | SAMN05216205_2715 | SAMN05216205_2273 | Penicillin-binding protein 1A. | Peptidoglycan synthetase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.935 |
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