(28 nodes) Geraniol degradation network (Pseudomonas mohnii)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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protein homology

Your Input:
	SEB60609.1	Enoyl-CoA hydratase/carnithine racemase. (261 aa)
	SEB60992.1	fatty-acyl-CoA synthase. (617 aa)
	SEB61996.1	enoyl-CoA hydratase. (250 aa)
	SEB62210.1	acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
	SEB64496.1	Short chain enoyl-CoA hydratase /Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (263 aa)
	SEB65689.1	Enoyl-CoA hydratase/carnithine racemase. (368 aa)
	SEB65758.1	Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
	SEB66376.1	enoyl-CoA hydratase. (270 aa)
	SEB97842.1	2-oxoglutaroyl-CoA hydrolase. (267 aa)
	fadA	3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (391 aa)
	fadB	Short chain enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (715 aa)
	SEC10752.1	enoyl-CoA hydratase. (229 aa)
	SEC10921.1	Short chain enoyl-CoA hydratase. (714 aa)
	SEC11436.1	citronellyl-CoA synthetase. (612 aa)
	SEC34702.1	Enoyl-CoA hydratase/carnithine racemase. (249 aa)
	SEC90147.1	Citronellol/citronellal dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (274 aa)
	SED25181.1	Enoyl-CoA hydratase/carnithine racemase. (370 aa)
	SED33691.1	acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
	SED37461.1	Enoyl-CoA hydratase/carnithine racemase. (263 aa)
	SED39019.1	Citronellol/citronellal dehydrogenase. (289 aa)
	SED41443.1	Enoyl-CoA hydratase. (260 aa)
	SED42118.1	Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
	SED46424.1	hydroxymethylglutaryl-CoA lyase. (299 aa)
	SED58783.1	Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)
	SED59027.1	acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
	SED64493.1	enoyl-CoA hydratase. (272 aa)
	SED65212.1	acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa)
	SED65730.1	crotonobetainyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)

Your Current Organism:

Pseudomonas mohnii

NCBI taxonomy Id: 395600
Other names: Arthrobacter sp. BDR2P2B2-M, CCUG 53115, DSM 18327, P. mohnii, Pseudomonas mohnii Camara et al. 2007, strain IpA-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SEB60609.1	SEB62210.1	SAMN05216205_0095	SAMN05216205_0148	Enoyl-CoA hydratase/carnithine racemase.	acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.729
SEB60609.1	SEB65689.1	SAMN05216205_0095	SAMN05216205_0256	Enoyl-CoA hydratase/carnithine racemase.	Enoyl-CoA hydratase/carnithine racemase.	0.627
SEB60609.1	SEB66376.1	SAMN05216205_0095	SAMN05216205_0275	Enoyl-CoA hydratase/carnithine racemase.	enoyl-CoA hydratase.	0.518
SEB60609.1	SEC10752.1	SAMN05216205_0095	SAMN05216205_1500	Enoyl-CoA hydratase/carnithine racemase.	enoyl-CoA hydratase.	0.467
SEB60609.1	SEC10921.1	SAMN05216205_0095	SAMN05216205_1504	Enoyl-CoA hydratase/carnithine racemase.	Short chain enoyl-CoA hydratase.	0.510
SEB60609.1	SED25181.1	SAMN05216205_0095	SAMN05216205_4686	Enoyl-CoA hydratase/carnithine racemase.	Enoyl-CoA hydratase/carnithine racemase.	0.590
SEB60609.1	SED33691.1	SAMN05216205_0095	SAMN05216205_4948	Enoyl-CoA hydratase/carnithine racemase.	acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.729
SEB60609.1	SED46424.1	SAMN05216205_0095	SAMN05216205_5307	Enoyl-CoA hydratase/carnithine racemase.	hydroxymethylglutaryl-CoA lyase.	0.565
SEB60609.1	SED59027.1	SAMN05216205_0095	SAMN05216205_5648	Enoyl-CoA hydratase/carnithine racemase.	acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.729
SEB60609.1	SED65212.1	SAMN05216205_0095	SAMN05216205_5825	Enoyl-CoA hydratase/carnithine racemase.	acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.729
SEB60609.1	SED65730.1	SAMN05216205_0095	SAMN05216205_5840	Enoyl-CoA hydratase/carnithine racemase.	crotonobetainyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.427
SEB60609.1	fadA	SAMN05216205_0095	SAMN05216205_1393	Enoyl-CoA hydratase/carnithine racemase.	3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.	0.729
SEB60609.1	fadB	SAMN05216205_0095	SAMN05216205_1394	Enoyl-CoA hydratase/carnithine racemase.	Short chain enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.	0.564
SEB60992.1	SEB61996.1	SAMN05216205_0109	SAMN05216205_0141	fatty-acyl-CoA synthase.	enoyl-CoA hydratase.	0.488
SEB60992.1	SEB65689.1	SAMN05216205_0109	SAMN05216205_0256	fatty-acyl-CoA synthase.	Enoyl-CoA hydratase/carnithine racemase.	0.480
SEB60992.1	SEB66376.1	SAMN05216205_0109	SAMN05216205_0275	fatty-acyl-CoA synthase.	enoyl-CoA hydratase.	0.457
SEB60992.1	SEC10752.1	SAMN05216205_0109	SAMN05216205_1500	fatty-acyl-CoA synthase.	enoyl-CoA hydratase.	0.443
SEB60992.1	SEC10921.1	SAMN05216205_0109	SAMN05216205_1504	fatty-acyl-CoA synthase.	Short chain enoyl-CoA hydratase.	0.817
SEB60992.1	SEC34702.1	SAMN05216205_0109	SAMN05216205_2095	fatty-acyl-CoA synthase.	Enoyl-CoA hydratase/carnithine racemase.	0.458
SEB60992.1	SEC90147.1	SAMN05216205_0109	SAMN05216205_3573	fatty-acyl-CoA synthase.	Citronellol/citronellal dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.713