STRINGSTRING
Msil_0249 Msil_0249 Msil_0387 Msil_0387 Msil_0388 Msil_0388 Msil_0592 Msil_0592 Msil_0593 Msil_0593 Msil_0594 Msil_0594 Msil_0684 Msil_0684 Msil_0685 Msil_0685 Msil_0686 Msil_0686 Msil_0851 Msil_0851 Msil_0924 Msil_0924 Msil_0926 Msil_0926 Msil_0927 Msil_0927 Msil_1297 Msil_1297 Msil_1298 Msil_1298 Msil_1366 Msil_1366 Msil_1380 Msil_1380 Msil_1463 Msil_1463 Msil_1611 Msil_1611 Msil_1617 Msil_1617 Msil_1746 Msil_1746 Msil_1852 Msil_1852 Msil_1927 Msil_1927 Msil_1988 Msil_1988 Msil_2079 Msil_2079 Msil_2379 Msil_2379 Msil_2521 Msil_2521 Msil_2577 Msil_2577 Msil_2985 Msil_2985 Msil_3008 Msil_3008 Msil_3226 Msil_3226 Msil_3376 Msil_3376 Msil_3377 Msil_3377 Msil_3419 Msil_3419 Msil_3421 Msil_3421 vapC-6 vapC-6 Msil_3485 Msil_3485 Msil_3500 Msil_3500 Msil_3501 Msil_3501 Msil_3599 Msil_3599 Msil_3887 Msil_3887
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Msil_0249KEGG: pzu:PHZ_c2369 hypothetical protein. (345 aa)
Msil_0387PFAM: monooxygenase FAD-binding; KEGG: sco:SCO0486 monooxygenase. (402 aa)
Msil_0388Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: msm:MSMEG_3319 repressor protein. (204 aa)
Msil_0592TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aeh:Mlg_2555 HAD family hydrolase. (262 aa)
Msil_0593Hypothetical protein. (166 aa)
Msil_0594KEGG: aor:AO090011000131 hypothetical protein. (368 aa)
Msil_0684PFAM: Carboxylesterase type B; KEGG: sma:SAV433 carboxylesterase; Belongs to the type-B carboxylesterase/lipase family. (574 aa)
Msil_0685KEGG: rfr:Rfer_2442 hypothetical protein. (387 aa)
Msil_0686KEGG: mrd:Mrad2831_3475 hypothetical protein. (362 aa)
Msil_0851PFAM: alpha/beta hydrolase fold; KEGG: bid:Bind_1872 alpha/beta hydrolase fold. (308 aa)
Msil_0924TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: met:M446_1106 tol-pal system-associated acyl-CoA thioesterase. (144 aa)
Msil_0926PFAM: protein of unknown function DUF55; KEGG: bid:Bind_3218 protein of unknown function DUF55. (139 aa)
Msil_0927KEGG: aor:AO090011000131 hypothetical protein. (371 aa)
Msil_1297PFAM: Carboxylesterase type B; KEGG: sma:SAV433 carboxylesterase; Belongs to the type-B carboxylesterase/lipase family. (571 aa)
Msil_1298KEGG: ang:An05g02280 hypothetical protein Pfam: PGAP1 Abhydrolase_1. (386 aa)
Msil_1366PFAM: monooxygenase FAD-binding; KEGG: mxa:MXAN_6265 hypothetical protein. (418 aa)
Msil_1380PFAM: monooxygenase FAD-binding; KEGG: sco:SCO7705 oxidoreductase. (372 aa)
Msil_1463PFAM: monooxygenase FAD-binding; KEGG: swi:Swit_3045 monooxygenase, FAD-binding. (598 aa)
Msil_1611KEGG: bbt:BBta_0886 hypothetical protein. (189 aa)
Msil_1617KEGG: aor:AO090011000131 hypothetical protein. (375 aa)
Msil_1746KEGG: ote:Oter_0553 hypothetical protein. (721 aa)
Msil_1852KEGG: pan:PODANSg6055 hypothetical protein. (387 aa)
Msil_1927KEGG: sen:SACE_7046 hypothetical protein. (422 aa)
Msil_1988KEGG: rfr:Rfer_2442 hypothetical protein. (396 aa)
Msil_2079PFAM: alpha/beta hydrolase fold; KEGG: bid:Bind_2904 3-oxoadipate enol-lactonase. (360 aa)
Msil_2379PFAM: Carboxylesterase type B; KEGG: sma:SAV433 carboxylesterase; Belongs to the type-B carboxylesterase/lipase family. (569 aa)
Msil_2521KEGG: pzu:PHZ_c2369 hypothetical protein. (470 aa)
Msil_2577KEGG: rle:RL4003 hypothetical protein. (515 aa)
Msil_2985PFAM: major facilitator superfamily MFS_1; KEGG: bid:Bind_3390 major facilitator superfamily MFS_1. (424 aa)
Msil_3008TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: met:M446_3414 haloacid dehalogenase, type II. (248 aa)
Msil_3226PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO6083 putative hydrolase. (297 aa)
Msil_3376PFAM: Carboxylesterase type B; KEGG: sma:SAV433 carboxylesterase; Belongs to the type-B carboxylesterase/lipase family. (562 aa)
Msil_3377KEGG: rfr:Rfer_2442 hypothetical protein. (384 aa)
Msil_3419KEGG: mrd:Mrad2831_3475 hypothetical protein. (255 aa)
Msil_3421PFAM: regulatory protein TetR; KEGG: swi:Swit_4362 transcriptional regulator, TetR family. (205 aa)
vapC-6PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (130 aa)
Msil_3485KEGG: mbb:BCG_1760c hypothetical protein. (76 aa)
Msil_3500PFAM: amidohydrolase 2; KEGG: rle:pRL120216 putative amidohydrolase. (339 aa)
Msil_3501PFAM: sulfatase; KEGG: bur:Bcep18194_B2021 sulfatase. (598 aa)
Msil_3599PFAM: Carboxylesterase type B; KEGG: sma:SAV433 carboxylesterase; Belongs to the type-B carboxylesterase/lipase family. (575 aa)
Msil_3887KEGG: aor:AO090011000131 hypothetical protein. (405 aa)
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
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