STRINGSTRING
BF93_01225 BF93_01225 glyA glyA BF93_01345 BF93_01345 BF93_01365 BF93_01365 BF93_01760 BF93_01760 BF93_02335 BF93_02335 BF93_02990 BF93_02990 acsA acsA BF93_03720 BF93_03720 BF93_03790 BF93_03790 BF93_06450 BF93_06450 BF93_06465 BF93_06465 BF93_06500 BF93_06500 purU purU acnA acnA BF93_08370 BF93_08370 gcvP gcvP gcvH gcvH gcvT gcvT BF93_08995 BF93_08995 BF93_09050 BF93_09050 BF93_09120 BF93_09120 BF93_09180 BF93_09180 BF93_09385 BF93_09385 BF93_09815 BF93_09815 BF93_10490 BF93_10490 BF93_11780 BF93_11780 BF93_12030 BF93_12030 BF93_12280 BF93_12280 BF93_13950 BF93_13950 BF93_14560 BF93_14560 BF93_15880 BF93_15880 BF93_17860 BF93_17860 BF93_17920 BF93_17920 BF93_17995 BF93_17995 BF93_18140 BF93_18140 BF93_18355 BF93_18355 BF93_18360 BF93_18360 BF93_18365 BF93_18365 BF93_18460 BF93_18460
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BF93_01225Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (422 aa)
BF93_01345acetyl-COA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (591 aa)
BF93_01365methylmalonyl-CoA carboxyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (529 aa)
BF93_01760Glycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycerate kinase type-1 family. (376 aa)
BF93_02335Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family. (465 aa)
BF93_02990Fe-S osidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
acsAacetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (659 aa)
BF93_03720acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (405 aa)
BF93_03790Hydroxypyruvate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the hyi family. (262 aa)
BF93_06450Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family. (445 aa)
BF93_06465Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (476 aa)
BF93_06500Dihydrolipoamide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa)
purUFormyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (294 aa)
acnAAconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (928 aa)
BF93_08370Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)
gcvPGlycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (997 aa)
gcvHGlycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (123 aa)
gcvTGlycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine. (375 aa)
BF93_08995Formamidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (418 aa)
BF93_09050Phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
BF93_09120Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (929 aa)
BF93_09180FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (503 aa)
BF93_093852-dehydro-3-deoxyphosphogluconate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
BF93_09815Glycine cleavage system protein T; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family. (398 aa)
BF93_10490Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (516 aa)
BF93_11780Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. (743 aa)
BF93_120302-hydroxy-3-oxopropionate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
BF93_12280methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)
BF93_13950DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (74 aa)
BF93_14560acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (493 aa)
BF93_15880Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
BF93_17860Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the catalase family. (485 aa)
BF93_179202-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
BF93_17995Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)
BF93_18140Catalyzes the reduction of mycothione or glutathione to mycothione or glutathione disulfide; Derived by automated computational analysis using gene prediction method: Protein Homology. (476 aa)
BF93_18355Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)
BF93_18360Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (899 aa)
BF93_18365Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
BF93_18460HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
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