STRINGSTRING
TK90_0528 TK90_0528 TK90_0694 TK90_0694 TK90_0695 TK90_0695 TK90_0740 TK90_0740 TK90_0741 TK90_0741 TK90_0948 TK90_0948 TK90_1721 TK90_1721 TK90_1722 TK90_1722
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TK90_0528KEGG: mxa:MXAN_6436 hypothetical protein. (161 aa)
TK90_0694KEGG: gfo:GFO_2079 hypothetical protein. (433 aa)
TK90_0695Lytic transglycosylase catalytic; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding protein 3 family. (523 aa)
TK90_0740PFAM: Na+/Picotransporter; KEGG: azc:AZC_3008 putative Na+/phosphate symporter. (551 aa)
TK90_0741PFAM: sodium:neurotransmitter symporter; KEGG: ilo:IL1275 SNF family Na(+)-dependent transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (463 aa)
TK90_0948TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; KEGG: hha:Hhal_0442 anion transporter. (509 aa)
TK90_1721PFAM: zinc/iron permease; KEGG: csa:Csal_3261 zinc/iron permease. (309 aa)
TK90_1722TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: pca:Pcar_2492 sodium/alanine symporter. (471 aa)
Your Current Organism:
Thioalkalivibrio sp. K90mix
NCBI taxonomy Id: 396595
Other names: T. sp. K90mix
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