STRINGSTRING
TK90_0445 TK90_0445 TK90_0021 TK90_0021 TK90_0441 TK90_0441 TK90_0565 TK90_0565
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TK90_0445PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ilo:IL2393 outer membrane receptor for Fe3+-dicitrate. (734 aa)
TK90_0021PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aeh:Mlg_2728 TonB-dependent receptor. (705 aa)
TK90_0441TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (305 aa)
TK90_0565TIGRFAM: protein TolA; TonB family protein; PFAM: Tol-Pal system TolA; KEGG: aeh:Mlg_0243 TonB family protein. (337 aa)
Your Current Organism:
Thioalkalivibrio sp. K90mix
NCBI taxonomy Id: 396595
Other names: T. sp. K90mix
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