STRINGSTRING
TK90_0558 TK90_0558 TK90_2218 TK90_2218 TK90_2219 TK90_2219 TK90_2290 TK90_2290 TK90_2315 TK90_2315 TK90_2365 TK90_2365 TK90_0040 TK90_0040 TK90_0057 TK90_0057 TK90_0059 TK90_0059 TK90_0065 TK90_0065 TK90_0144 TK90_0144 TK90_0146 TK90_0146 TK90_0149 TK90_0149 TK90_0158 TK90_0158 TK90_0159 TK90_0159 TK90_0161 TK90_0161 TK90_0186 TK90_0186 TK90_0187 TK90_0187 TK90_0237 TK90_0237 dsbD dsbD TK90_0432 TK90_0432 TK90_0433 TK90_0433 TK90_0434 TK90_0434 TK90_0518 TK90_0518 TK90_0522 TK90_0522 TK90_2217 TK90_2217 TK90_0687 TK90_0687 nuoA nuoA nuoB nuoB nuoC nuoC nuoD nuoD TK90_0712 TK90_0712 TK90_0713 TK90_0713 TK90_0714 TK90_0714 TK90_0717 TK90_0717 nuoK nuoK TK90_0719 TK90_0719 TK90_0720 TK90_0720 nuoN nuoN TK90_0748 TK90_0748 TK90_0751 TK90_0751 TK90_0812 TK90_0812 TK90_0835 TK90_0835 TK90_0881 TK90_0881 TK90_0892 TK90_0892 TK90_0991 TK90_0991 TK90_0999 TK90_0999 TK90_1000 TK90_1000 TK90_1001 TK90_1001 TK90_1023 TK90_1023 TK90_1225 TK90_1225 TK90_1226 TK90_1226 TK90_1290 TK90_1290 TK90_1308 TK90_1308 TK90_1422 TK90_1422 TK90_1505 TK90_1505 TK90_1641 TK90_1641 msrQ msrQ TK90_1770 TK90_1770 rnfA rnfA rnfB rnfB rnfC rnfC rnfD rnfD rnfG rnfG rnfE rnfE TK90_1848 TK90_1848 TK90_1877 TK90_1877 TK90_1878 TK90_1878 TK90_1880 TK90_1880 TK90_1936 TK90_1936 TK90_1951 TK90_1951
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TK90_0558TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; KEGG: pst:PSPTO_1686 trp repressor binding protein; Belongs to the WrbA family. (205 aa)
TK90_2218Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (469 aa)
TK90_2219Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (200 aa)
TK90_2290PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: hmu:Hmuk_0733 protein of unknown function DUF405. (391 aa)
TK90_2315KEGG: kko:Kkor_2029 hypothetical protein. (148 aa)
TK90_2365PFAM: cytochrome c class I; KEGG: dsh:Dshi_1873 cytochrome c class I. (107 aa)
TK90_0040PFAM: cytochrome c class I; KEGG: aeh:Mlg_2853 cytochrome c, class I. (207 aa)
TK90_0057PFAM: DMSO reductase anchor subunit (DmsC); KEGG: har:HEAR3344 hypothetical protein. (327 aa)
TK90_0059PFAM: molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; KEGG: har:HEAR3342 putative molybdopterin oxidoreductase family protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (953 aa)
TK90_0065TIGRFAM: adenylylsulfate reductase, alpha subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: tbd:Tbd_2282 adenylylsulfate reductase subunit alpha. (632 aa)
TK90_0144PFAM: molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; KEGG: aeh:Mlg_1675 molybdopterin oxidoreductase Fe4s4 region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (968 aa)
TK90_0146PFAM: DMSO reductase anchor subunit (DmsC); KEGG: tbd:Tbd_0572 DMSO reductase chain C. (349 aa)
TK90_0149PFAM: cytochrome c class I; KEGG: ngk:NGK_1553 cytochrome c5. (287 aa)
TK90_0158KEGG: mfa:Mfla_0629 cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (495 aa)
TK90_0159TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: mfa:Mfla_0630 cytochrome c oxidase, cbb3-type, subunit II. (244 aa)
TK90_0161Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (307 aa)
TK90_0186PFAM: cytochrome c oxidase subunit II; KEGG: eba:ebA3665 cytochrome-c oxidase subunit II. (172 aa)
TK90_0187PFAM: cytochrome c oxidase subunit I; KEGG: eba:ebA3666 cytochrome c oxidase, subunit I. (483 aa)
TK90_0237KEGG: hha:Hhal_1162 cytochrome c, class I. (104 aa)
dsbDCytochrome c biogenesis protein transmembrane region; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. (789 aa)
TK90_0432KEGG: rpb:RPB_4372 hypothetical protein. (284 aa)
TK90_0433KEGG: ade:Adeh_2280 hypothetical protein. (229 aa)
TK90_0434KEGG: ade:Adeh_2280 hypothetical protein. (227 aa)
TK90_0518High potential iron-sulfur protein; Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria; Belongs to the high-potential iron-sulfur protein (HiPIP) family. (107 aa)
TK90_0522KEGG: aeh:Mlg_1402 hypothetical protein. (177 aa)
TK90_2217PFAM: cytochrome c1; KEGG: noc:Noc_0297 cytochrome c1. (247 aa)
TK90_0687KEGG: vpa:VPA1144 hypothetical protein. (107 aa)
nuoANADH-ubiquinone/plastoquinone oxidoreductase chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (118 aa)
nuoBNADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (158 aa)
nuoCNADH (or F420H2) dehydrogenase, subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (239 aa)
nuoDNADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (417 aa)
TK90_0712TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: hna:Hneap_1960 NADH-quinone oxidoreductase, E subunit. (176 aa)
TK90_0713NADH-quinone oxidoreductase, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (426 aa)
TK90_0714NADH-quinone oxidoreductase, chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (798 aa)
TK90_0717NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (217 aa)
nuoKNADH-ubiquinone oxidoreductase chain 4L; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (101 aa)
TK90_0719KEGG: tmz:Tmz1t_1753 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein. (667 aa)
TK90_0720TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: aeh:Mlg_1958 proton-translocating NADH-quinone oxidoreductase, chain M. (504 aa)
nuoNProton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (482 aa)
TK90_0748PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: aeh:Mlg_2090 putative monovalent cation/H+ antiporter subunit A. (767 aa)
TK90_0751PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: aeh:Mlg_2093 NADH dehydrogenase (quinone). (501 aa)
TK90_0812PFAM: Di-haem cytochrome c peroxidase; KEGG: aeh:Mlg_2854 cytochrome-c peroxidase. (334 aa)
TK90_0835TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: kko:Kkor_1501 ferredoxin, 2Fe-2S type, ISC system. (112 aa)
TK90_0881PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; KEGG: hna:Hneap_0909 NADH/ubiquinone/plastoquinone (complex I). (560 aa)
TK90_0892KEGG: net:Neut_1110 ubiquinol-cytochrome c reductase, iron-sulfur subunit. (187 aa)
TK90_0991KEGG: sma:SAV_1283 hypothetical protein. (362 aa)
TK90_0999PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: noc:Noc_1279 NADH/ubiquinone/plastoquinone (complex I). (574 aa)
TK90_1000PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: psa:PST_0384 putative NADH dehydrogenase I chain M. (507 aa)
TK90_1001PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: noc:Noc_1281 NADH dehydrogenase (quinone). (494 aa)
TK90_10234Fe-4S ferredoxin iron-sulfur binding domain protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (107 aa)
TK90_1225PFAM: cytochrome c prime; KEGG: aeh:Mlg_1163 cytochrome c, class II. (155 aa)
TK90_1226Gluconate 2-dehydrogenase (acceptor); KEGG: aeh:Mlg_1162 cytochrome c. (308 aa)
TK90_1290Hypothetical protein; KEGG: rpe:RPE_4867 cytochrome c family protein. (202 aa)
TK90_1308PFAM: transglutaminase domain protein; KEGG: azo:azo0653 hypothetical protein. (243 aa)
TK90_1422PFAM: cytochrome c class I; KEGG: tbd:Tbd_0129 cytochrome c-type protein. (222 aa)
TK90_1505TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; KEGG: azo:azo2968 trp repressor binding protein (flavodoxin). (206 aa)
TK90_1641KEGG: tbd:Tbd_1323 hypothetical protein. (156 aa)
msrQFerric reductase domain protein protein transmembrane component domain protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for re [...] (215 aa)
TK90_1770PFAM: cytochrome B561; KEGG: bxe:Bxe_B1667 putative type-b cytochrome. (193 aa)
rnfAElectron transport complex, RnfABCDGE type, A subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. (192 aa)
rnfBElectron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. (194 aa)
rnfCElectron transport complex, RnfABCDGE type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. (541 aa)
rnfDElectron transport complex, RnfABCDGE type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. (353 aa)
rnfGElectron transport complex, RnfABCDGE type, G subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. (222 aa)
rnfEElectron transport complex, RnfABCDGE type, E subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. (230 aa)
TK90_1848KEGG: mei:Msip34_1440 hypothetical protein. (103 aa)
TK90_1877TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: noc:Noc_2470 succinate dehydrogenase/fumarate reductase iron-sulfur protein. (233 aa)
TK90_1878TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; succinate dehydrogenase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: noc:Noc_2471 succinate dehydrogenase or fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (591 aa)
TK90_1880TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: azo:azo1549 succinate dehydrogenase. (126 aa)
TK90_1936PFAM: cytochrome c class I; KEGG: tmz:Tmz1t_3973 cytochrome c class I. (188 aa)
TK90_1951PFAM: glutaredoxin 2; KEGG: cvi:CV_2062 hypothetical protein. (80 aa)
Your Current Organism:
Thioalkalivibrio sp. K90mix
NCBI taxonomy Id: 396595
Other names: T. sp. K90mix
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