7 items (Veillonella atypica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mce	methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)
	ARF99607.1	Methylmalonyl Co-A mutase-associated GTPase MeaB; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
	scpA_2	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)
	ARF99609.1	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (548 aa)
	ARG00107.1	Methylmalonyl Co-A mutase-associated GTPase MeaB; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)
	ARG00108.1	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (729 aa)
	ARG00109.1	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (720 aa)

Your Current Organism:

Veillonella atypica

NCBI taxonomy Id: 39777
Other names: ATCC 17744, DSM 20739, NCTC 11830, V. atypica, Veillonella parvula subsp. atypica, strain Kon

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARF99607.1	ARF99609.1	B7L28_06275	B7L28_06285	Methylmalonyl Co-A mutase-associated GTPase MeaB; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
ARF99607.1	ARG00108.1	B7L28_06275	B7L28_09040	Methylmalonyl Co-A mutase-associated GTPase MeaB; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
ARF99607.1	ARG00109.1	B7L28_06275	B7L28_09045	Methylmalonyl Co-A mutase-associated GTPase MeaB; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.860
ARF99607.1	mce	B7L28_06275	B7L28_06270	Methylmalonyl Co-A mutase-associated GTPase MeaB; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952
ARF99607.1	scpA_2	B7L28_06275	B7L28_06280	Methylmalonyl Co-A mutase-associated GTPase MeaB; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
ARF99609.1	ARF99607.1	B7L28_06285	B7L28_06275	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methylmalonyl Co-A mutase-associated GTPase MeaB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
ARF99609.1	ARG00107.1	B7L28_06285	B7L28_09035	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methylmalonyl Co-A mutase-associated GTPase MeaB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.514
ARF99609.1	ARG00108.1	B7L28_06285	B7L28_09040	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.598
ARF99609.1	ARG00109.1	B7L28_06285	B7L28_09045	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.687
ARF99609.1	mce	B7L28_06285	B7L28_06270	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
ARF99609.1	scpA_2	B7L28_06285	B7L28_06280	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
ARG00107.1	ARF99609.1	B7L28_09035	B7L28_06285	Methylmalonyl Co-A mutase-associated GTPase MeaB; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.514
ARG00107.1	ARG00108.1	B7L28_09035	B7L28_09040	Methylmalonyl Co-A mutase-associated GTPase MeaB; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
ARG00107.1	ARG00109.1	B7L28_09035	B7L28_09045	Methylmalonyl Co-A mutase-associated GTPase MeaB; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
ARG00107.1	mce	B7L28_09035	B7L28_06270	Methylmalonyl Co-A mutase-associated GTPase MeaB; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.645
ARG00107.1	scpA_2	B7L28_09035	B7L28_06280	Methylmalonyl Co-A mutase-associated GTPase MeaB; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.550
ARG00108.1	ARF99607.1	B7L28_09040	B7L28_06275	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methylmalonyl Co-A mutase-associated GTPase MeaB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
ARG00108.1	ARF99609.1	B7L28_09040	B7L28_06285	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.598
ARG00108.1	ARG00107.1	B7L28_09040	B7L28_09035	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methylmalonyl Co-A mutase-associated GTPase MeaB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
ARG00108.1	ARG00109.1	B7L28_09040	B7L28_09045	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999