STRINGSTRING
B7L28_00925 B7L28_00925 ARF99094.1 ARF99094.1 ARF99610.1 ARF99610.1 ARF99745.1 ARF99745.1 porB porB ARF99811.1 ARF99811.1 fumB fumB ARF99879.1 ARF99879.1 ARG00022.1 ARG00022.1 ARG00058.1 ARG00058.1 ARG00059.1 ARG00059.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
B7L28_00925Diguanylate cyclase; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (542 aa)
ARF99094.1Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1148 aa)
ARF99610.1acetyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (500 aa)
ARF99745.1Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1179 aa)
porB2-oxoacid ferredoxin oxidoreductase; Catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
ARF99811.12-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (583 aa)
fumBFumarate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa)
ARF99879.1Fumarate hydratase; Catalyzes the reversible hydration of fumaric acid to yield I-malic acid; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
ARG00022.1Class II fumarate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
ARG00058.1Heterodisulfide reductase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
ARG00059.1(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
Your Current Organism:
Veillonella atypica
NCBI taxonomy Id: 39777
Other names: ATCC 17744, DSM 20739, NCTC 11830, V. atypica, Veillonella parvula subsp. atypica, strain Kon
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