STRINGSTRING
ARF98621.1 ARF98621.1 ARF98622.1 ARF98622.1 ARF99602.1 ARF99602.1 ARF99603.1 ARF99603.1 ARF99604.1 ARF99604.1 ARF99610.1 ARF99610.1 ARF99673.1 ARF99673.1 ARF99674.1 ARF99674.1 ARF99745.1 ARF99745.1 ARF99789.1 ARF99789.1 ARF99790.1 ARF99790.1 porB porB ARF99811.1 ARF99811.1 ARG00058.1 ARG00058.1 ARG00059.1 ARG00059.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ARF98621.1Autonomous glycyl radical cofactor GrcA; Derived by automated computational analysis using gene prediction method: Protein Homology. (79 aa)
ARF98622.1Formate C-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (705 aa)
ARF99602.1glutaconyl-CoA decarboxylase subunit beta; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD). (373 aa)
ARF99603.1Composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
ARF99604.1Sodium pump decarboxylase; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family. (114 aa)
ARF99610.1acetyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (500 aa)
ARF99673.1Acetolactate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)
ARF99674.1Acetolactate synthase, large subunit, biosynthetic type; Derived by automated computational analysis using gene prediction method: Protein Homology. (575 aa)
ARF99745.1Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1179 aa)
ARF99789.1Acetolactate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)
ARF99790.1Acetolactate synthase, large subunit, biosynthetic type; Derived by automated computational analysis using gene prediction method: Protein Homology. (569 aa)
porB2-oxoacid ferredoxin oxidoreductase; Catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
ARF99811.12-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (583 aa)
ARG00058.1Heterodisulfide reductase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
ARG00059.1(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
Your Current Organism:
Veillonella atypica
NCBI taxonomy Id: 39777
Other names: ATCC 17744, DSM 20739, NCTC 11830, V. atypica, Veillonella parvula subsp. atypica, strain Kon
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