STRINGSTRING
Aave_1037 Aave_1037 Aave_1038 Aave_1038 Aave_1039 Aave_1039 Aave_1040 Aave_1040 Aave_1041 Aave_1041
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Aave_1037KEGG: rme:Rmet_4161 putative transmembrane protein. (457 aa)
Aave_1038PFAM: glycosyl transferase, group 1; KEGG: rso:RSc2271 hypothetical protein. (512 aa)
Aave_1039KEGG: rso:RSc2272 probable transmembrane protein. (337 aa)
Aave_1040KEGG: rme:Rmet_4158 putative transmembrane protein. (467 aa)
Aave_1041KEGG: rso:RSc2274 putative lipoprotein. (184 aa)
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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